Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 AC004687.1-201ENST00000579003 1625 ntBASIC12.66□□□□□ -0.38
LIMD2Q9BT23 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 AL356441.2-201ENST00000443009 864 ntBASIC12.66□□□□□ -0.38
LIMD2Q9BT23 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 AL499627.2-201ENST00000606283 725 ntBASIC12.66□□□□□ -0.38
LIMD2Q9BT23 AC087239.1-201ENST00000622671 572 ntBASIC12.66□□□□□ -0.38
LIMD2Q9BT23 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 GUSBP5-202ENST00000510805 1989 ntBASIC12.66□□□□□ -0.38
LIMD2Q9BT23 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LIMD2Q9BT23 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 GALC-202ENST00000393568 2054 ntTSL 2 BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 SRR-208ENST00000576848 588 ntTSL 4 BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 AC068587.7-201ENST00000641602 218 ntBASIC12.65□□□□□ -0.38
LIMD2Q9BT23 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
LIMD2Q9BT23 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 COMT-203ENST00000403184 2217 ntTSL 2 BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIMD2Q9BT23 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 WWC2-AS2-201ENST00000578387 2183 ntBASIC12.63□□□□□ -0.39
LIMD2Q9BT23 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIMD2Q9BT23 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 ECEL1P1-201ENST00000373592 1742 ntBASIC12.62□□□□□ -0.39
LIMD2Q9BT23 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms