Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.37■□□□□ 0.53
CSMD1Q96PZ7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CSMD1Q96PZ7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 BX276092.2-201ENST00000417668 665 ntBASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 AL359736.2-201ENST00000621992 437 ntBASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD1Q96PZ7 AC005224.4-201ENST00000583262 1652 ntBASIC18.34■□□□□ 0.53
CSMD1Q96PZ7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.34■□□□□ 0.53
CSMD1Q96PZ7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSMD1Q96PZ7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
CSMD1Q96PZ7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSMD1Q96PZ7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSMD1Q96PZ7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.34■□□□□ 0.53
CSMD1Q96PZ7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSMD1Q96PZ7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSMD1Q96PZ7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSMD1Q96PZ7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.34■□□□□ 0.53
CSMD1Q96PZ7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.33■□□□□ 0.53
CSMD1Q96PZ7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CSMD1Q96PZ7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSMD1Q96PZ7 AC008694.1-202ENST00000636953 945 ntBASIC18.33■□□□□ 0.53
CSMD1Q96PZ7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
CSMD1Q96PZ7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSMD1Q96PZ7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSMD1Q96PZ7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSMD1Q96PZ7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSMD1Q96PZ7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.33■□□□□ 0.52
CSMD1Q96PZ7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.33■□□□□ 0.52
CSMD1Q96PZ7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.33■□□□□ 0.52
CSMD1Q96PZ7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSMD1Q96PZ7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSMD1Q96PZ7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms