Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A4EQ96PG1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
MS4A4EQ96PG1 AL031432.3-201ENST00000607698 485 ntBASIC19.99■□□□□ 0.79
MS4A4EQ96PG1 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.99■□□□□ 0.79
MS4A4EQ96PG1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
MS4A4EQ96PG1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A4EQ96PG1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A4EQ96PG1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.99■□□□□ 0.79
MS4A4EQ96PG1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A4EQ96PG1 AC244015.2-201ENST00000616358 1861 ntBASIC19.99■□□□□ 0.79
MS4A4EQ96PG1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MS4A4EQ96PG1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
MS4A4EQ96PG1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.98■□□□□ 0.79
MS4A4EQ96PG1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MS4A4EQ96PG1 AC026471.6-201ENST00000622954 1905 ntBASIC19.98■□□□□ 0.79
MS4A4EQ96PG1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MS4A4EQ96PG1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.98■□□□□ 0.79
MS4A4EQ96PG1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MS4A4EQ96PG1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.98■□□□□ 0.79
MS4A4EQ96PG1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MS4A4EQ96PG1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MS4A4EQ96PG1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.98■□□□□ 0.79
MS4A4EQ96PG1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MS4A4EQ96PG1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
MS4A4EQ96PG1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MS4A4EQ96PG1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.96■□□□□ 0.79
MS4A4EQ96PG1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.96■□□□□ 0.79
MS4A4EQ96PG1 AC104564.3-201ENST00000582367 638 ntBASIC19.96■□□□□ 0.79
MS4A4EQ96PG1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.96■□□□□ 0.79
MS4A4EQ96PG1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
MS4A4EQ96PG1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MS4A4EQ96PG1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MS4A4EQ96PG1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MS4A4EQ96PG1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MS4A4EQ96PG1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MS4A4EQ96PG1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.96■□□□□ 0.79
MS4A4EQ96PG1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.95■□□□□ 0.78
MS4A4EQ96PG1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A4EQ96PG1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
MS4A4EQ96PG1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A4EQ96PG1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A4EQ96PG1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.95■□□□□ 0.78
MS4A4EQ96PG1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A4EQ96PG1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.95■□□□□ 0.78
MS4A4EQ96PG1 AL136967.2-201ENST00000623968 743 ntBASIC19.95■□□□□ 0.78
MS4A4EQ96PG1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A4EQ96PG1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A4EQ96PG1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.95■□□□□ 0.78
MS4A4EQ96PG1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.95■□□□□ 0.78
MS4A4EQ96PG1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 AP006587.3-201ENST00000525742 1516 ntBASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 AC105233.4-201ENST00000642045 216 ntBASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 PKD1P6-201ENST00000343738 4769 ntBASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
MS4A4EQ96PG1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A4EQ96PG1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.93■□□□□ 0.78
MS4A4EQ96PG1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A4EQ96PG1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A4EQ96PG1 SUDS3P1-201ENST00000505831 966 ntBASIC19.93■□□□□ 0.78
MS4A4EQ96PG1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.93■□□□□ 0.78
MS4A4EQ96PG1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A4EQ96PG1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A4EQ96PG1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
MS4A4EQ96PG1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A4EQ96PG1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A4EQ96PG1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A4EQ96PG1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.93■□□□□ 0.78
MS4A4EQ96PG1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A4EQ96PG1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.92■□□□□ 0.78
MS4A4EQ96PG1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A4EQ96PG1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A4EQ96PG1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.92■□□□□ 0.78
MS4A4EQ96PG1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MS4A4EQ96PG1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.92■□□□□ 0.78
MS4A4EQ96PG1 MIR572-201ENST00000384983 95 ntBASIC19.92■□□□□ 0.78
MS4A4EQ96PG1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A4EQ96PG1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms