Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ZNF48Q96MX3 KRT87P-202ENST00000534226 1464 ntBASIC17.41■□□□□ 0.38
ZNF48Q96MX3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
ZNF48Q96MX3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 MIR663A-201ENST00000385250 93 ntBASIC17.4■□□□□ 0.38
ZNF48Q96MX3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 MFSD11-216ENST00000590393 1141 ntBASIC17.4■□□□□ 0.38
ZNF48Q96MX3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 AC233723.2-201ENST00000623798 2106 ntBASIC17.4■□□□□ 0.38
ZNF48Q96MX3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF48Q96MX3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF48Q96MX3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF48Q96MX3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF48Q96MX3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF48Q96MX3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF48Q96MX3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF48Q96MX3 AL109923.1-201ENST00000618799 583 ntBASIC17.39■□□□□ 0.37
ZNF48Q96MX3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ZNF48Q96MX3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ZNF48Q96MX3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 C1orf229-201ENST00000623686 2258 ntBASIC17.38■□□□□ 0.37
ZNF48Q96MX3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF48Q96MX3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ZNF48Q96MX3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF48Q96MX3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF48Q96MX3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF48Q96MX3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF48Q96MX3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF48Q96MX3 AL355802.2-201ENST00000402069 882 ntBASIC17.37■□□□□ 0.37
ZNF48Q96MX3 NCF1B-203ENST00000435988 1254 ntBASIC17.37■□□□□ 0.37
ZNF48Q96MX3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.37■□□□□ 0.37
ZNF48Q96MX3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.37■□□□□ 0.37
ZNF48Q96MX3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF48Q96MX3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF48Q96MX3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF48Q96MX3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF48Q96MX3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF48Q96MX3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF48Q96MX3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ZNF48Q96MX3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ZNF48Q96MX3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF48Q96MX3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF48Q96MX3 LINC01960-201ENST00000563759 1884 ntBASIC17.36■□□□□ 0.37
ZNF48Q96MX3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.36■□□□□ 0.37
ZNF48Q96MX3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.36■□□□□ 0.37
ZNF48Q96MX3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF48Q96MX3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
ZNF48Q96MX3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF48Q96MX3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF48Q96MX3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.36■□□□□ 0.37
ZNF48Q96MX3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ZNF48Q96MX3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 AC079089.2-201ENST00000531211 1277 ntBASIC17.35■□□□□ 0.37
ZNF48Q96MX3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 UBE2DNL-204ENST00000602536 740 ntBASIC17.35■□□□□ 0.37
ZNF48Q96MX3 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF48Q96MX3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms