Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC126544.1-201ENST00000580842 1059 ntBASIC22.87■■□□□ 1.25
DDX1Q92499 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX1Q92499 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX1Q92499 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX1Q92499 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX1Q92499 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX1Q92499 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX1Q92499 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX1Q92499 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX1Q92499 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX1Q92499 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.86■■□□□ 1.25
DDX1Q92499 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX1Q92499 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX1Q92499 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
DDX1Q92499 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
DDX1Q92499 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX1Q92499 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX1Q92499 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX1Q92499 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX1Q92499 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX1Q92499 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX1Q92499 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX1Q92499 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX1Q92499 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX1Q92499 AC034268.1-201ENST00000441047 882 ntBASIC22.85■■□□□ 1.25
DDX1Q92499 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.85■■□□□ 1.25
DDX1Q92499 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX1Q92499 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX1Q92499 AC244015.2-201ENST00000616358 1861 ntBASIC22.85■■□□□ 1.25
DDX1Q92499 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX1Q92499 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX1Q92499 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX1Q92499 AP004607.7-201ENST00000527152 1677 ntBASIC22.84■■□□□ 1.25
DDX1Q92499 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX1Q92499 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
DDX1Q92499 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX1Q92499 ID1-201ENST00000376105 1233 ntBASIC22.84■■□□□ 1.25
DDX1Q92499 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
DDX1Q92499 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.84■■□□□ 1.25
DDX1Q92499 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.84■■□□□ 1.25
DDX1Q92499 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
DDX1Q92499 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.84■■□□□ 1.25
DDX1Q92499 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX1Q92499 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX1Q92499 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX1Q92499 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.84■■□□□ 1.25
DDX1Q92499 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.84■■□□□ 1.25
DDX1Q92499 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.84■■□□□ 1.25
DDX1Q92499 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX1Q92499 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.84■■□□□ 1.25
DDX1Q92499 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.84■■□□□ 1.25
DDX1Q92499 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.84■■□□□ 1.25
DDX1Q92499 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
DDX1Q92499 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX1Q92499 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX1Q92499 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX1Q92499 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX1Q92499 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
DDX1Q92499 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.83■■□□□ 1.25
DDX1Q92499 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX1Q92499 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.83■■□□□ 1.25
DDX1Q92499 AC022517.1-201ENST00000592429 346 ntBASIC22.83■■□□□ 1.25
DDX1Q92499 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.83■■□□□ 1.25
DDX1Q92499 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX1Q92499 AC026310.3-201ENST00000625186 2373 ntBASIC22.83■■□□□ 1.24
DDX1Q92499 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX1Q92499 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX1Q92499 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX1Q92499 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.82■■□□□ 1.24
DDX1Q92499 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX1Q92499 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.82■■□□□ 1.24
DDX1Q92499 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.82■■□□□ 1.24
DDX1Q92499 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.82■■□□□ 1.24
DDX1Q92499 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.82■■□□□ 1.24
DDX1Q92499 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
DDX1Q92499 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX1Q92499 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX1Q92499 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
DDX1Q92499 AL034346.1-201ENST00000568244 1277 ntBASIC22.81■■□□□ 1.24
DDX1Q92499 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX1Q92499 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX1Q92499 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.81■■□□□ 1.24
DDX1Q92499 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
DDX1Q92499 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX1Q92499 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX1Q92499 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
DDX1Q92499 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
DDX1Q92499 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.8■■□□□ 1.24
DDX1Q92499 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.8■■□□□ 1.24
DDX1Q92499 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
DDX1Q92499 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
DDX1Q92499 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
DDX1Q92499 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
DDX1Q92499 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.8■■□□□ 1.24
DDX1Q92499 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
DDX1Q92499 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.8■■□□□ 1.24
DDX1Q92499 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.8■■□□□ 1.24
DDX1Q92499 TSPY26P-201ENST00000476365 1326 ntBASIC22.8■■□□□ 1.24
DDX1Q92499 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.8■■□□□ 1.24
DDX1Q92499 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms