Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tram1Q91V04 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tram1Q91V04 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tram1Q91V04 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Tram1Q91V04 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tram1Q91V04 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tram1Q91V04 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tram1Q91V04 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.28■□□□□ 0.2
Tram1Q91V04 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tram1Q91V04 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tram1Q91V04 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tram1Q91V04 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tram1Q91V04 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tram1Q91V04 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tram1Q91V04 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tram1Q91V04 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.27■□□□□ 0.2
Tram1Q91V04 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Tram1Q91V04 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tram1Q91V04 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tram1Q91V04 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tram1Q91V04 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tram1Q91V04 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tram1Q91V04 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tram1Q91V04 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tram1Q91V04 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tram1Q91V04 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tram1Q91V04 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tram1Q91V04 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tram1Q91V04 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tram1Q91V04 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.26■□□□□ 0.19
Tram1Q91V04 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tram1Q91V04 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tram1Q91V04 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tram1Q91V04 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.26■□□□□ 0.19
Tram1Q91V04 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tram1Q91V04 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tram1Q91V04 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tram1Q91V04 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tram1Q91V04 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Tram1Q91V04 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tram1Q91V04 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tram1Q91V04 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tram1Q91V04 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.25■□□□□ 0.19
Tram1Q91V04 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.25■□□□□ 0.19
Tram1Q91V04 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.25■□□□□ 0.19
Tram1Q91V04 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.25■□□□□ 0.19
Tram1Q91V04 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tram1Q91V04 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tram1Q91V04 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tram1Q91V04 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Tram1Q91V04 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tram1Q91V04 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tram1Q91V04 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tram1Q91V04 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tram1Q91V04 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tram1Q91V04 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tram1Q91V04 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Tram1Q91V04 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tram1Q91V04 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tram1Q91V04 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.24■□□□□ 0.19
Tram1Q91V04 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.24■□□□□ 0.19
Tram1Q91V04 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.24■□□□□ 0.19
Tram1Q91V04 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.24■□□□□ 0.19
Tram1Q91V04 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Tram1Q91V04 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tram1Q91V04 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tram1Q91V04 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tram1Q91V04 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.24■□□□□ 0.19
Tram1Q91V04 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tram1Q91V04 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tram1Q91V04 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tram1Q91V04 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tram1Q91V04 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.23■□□□□ 0.19
Tram1Q91V04 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.23■□□□□ 0.19
Tram1Q91V04 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.23■□□□□ 0.19
Tram1Q91V04 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Tram1Q91V04 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.23■□□□□ 0.19
Tram1Q91V04 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Tram1Q91V04 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tram1Q91V04 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.22■□□□□ 0.19
Tram1Q91V04 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tram1Q91V04 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tram1Q91V04 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms