Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.92■■□□□ 1.1
SHROOM3Q8TF72 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM3Q8TF72 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM3Q8TF72 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM3Q8TF72 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.92■■□□□ 1.1
SHROOM3Q8TF72 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM3Q8TF72 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SHROOM3Q8TF72 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.92■■□□□ 1.1
SHROOM3Q8TF72 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.92■■□□□ 1.1
SHROOM3Q8TF72 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.91■■□□□ 1.1
SHROOM3Q8TF72 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.91■■□□□ 1.1
SHROOM3Q8TF72 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHROOM3Q8TF72 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHROOM3Q8TF72 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHROOM3Q8TF72 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.91■■□□□ 1.1
SHROOM3Q8TF72 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.9■■□□□ 1.1
SHROOM3Q8TF72 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.9■■□□□ 1.1
SHROOM3Q8TF72 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM3Q8TF72 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.9■■□□□ 1.1
SHROOM3Q8TF72 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM3Q8TF72 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.9■■□□□ 1.1
SHROOM3Q8TF72 AL358852.1-201ENST00000623174 1268 ntBASIC21.9■■□□□ 1.1
SHROOM3Q8TF72 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM3Q8TF72 OXCT2P1-201ENST00000447263 1535 ntBASIC21.9■■□□□ 1.1
SHROOM3Q8TF72 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM3Q8TF72 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM3Q8TF72 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM3Q8TF72 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SHROOM3Q8TF72 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHROOM3Q8TF72 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHROOM3Q8TF72 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 AL354811.1-201ENST00000610286 706 ntBASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 AC105233.4-201ENST00000642045 216 ntBASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.89■■□□□ 1.09
SHROOM3Q8TF72 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 BX005040.4-201ENST00000637145 1518 ntBASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM3Q8TF72 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.87■■□□□ 1.09
SHROOM3Q8TF72 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHROOM3Q8TF72 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
SHROOM3Q8TF72 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHROOM3Q8TF72 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHROOM3Q8TF72 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHROOM3Q8TF72 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SHROOM3Q8TF72 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.87■■□□□ 1.09
SHROOM3Q8TF72 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHROOM3Q8TF72 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SHROOM3Q8TF72 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.86■■□□□ 1.09
SHROOM3Q8TF72 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM3Q8TF72 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM3Q8TF72 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.86■■□□□ 1.09
SHROOM3Q8TF72 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.86■■□□□ 1.09
SHROOM3Q8TF72 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SHROOM3Q8TF72 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM3Q8TF72 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM3Q8TF72 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM3Q8TF72 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHROOM3Q8TF72 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHROOM3Q8TF72 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms