Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNIH3Q8TBE1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.52■□□□□ 0.72
CNIH3Q8TBE1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNIH3Q8TBE1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.52■□□□□ 0.72
CNIH3Q8TBE1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.52■□□□□ 0.72
CNIH3Q8TBE1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CNIH3Q8TBE1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNIH3Q8TBE1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CNIH3Q8TBE1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNIH3Q8TBE1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNIH3Q8TBE1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CNIH3Q8TBE1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNIH3Q8TBE1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.52■□□□□ 0.72
CNIH3Q8TBE1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNIH3Q8TBE1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNIH3Q8TBE1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.52■□□□□ 0.71
CNIH3Q8TBE1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
CNIH3Q8TBE1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CNIH3Q8TBE1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNIH3Q8TBE1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 AL391422.3-201ENST00000603791 2761 ntBASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH3Q8TBE1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNIH3Q8TBE1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.5■□□□□ 0.71
CNIH3Q8TBE1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNIH3Q8TBE1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CNIH3Q8TBE1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNIH3Q8TBE1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNIH3Q8TBE1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.5■□□□□ 0.71
CNIH3Q8TBE1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.5■□□□□ 0.71
CNIH3Q8TBE1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CNIH3Q8TBE1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CNIH3Q8TBE1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
CNIH3Q8TBE1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 AC104564.3-201ENST00000582367 638 ntBASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 PVT1_1.1-201ENST00000615125 194 ntBASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNIH3Q8TBE1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 ABHD17AP5-201ENST00000580133 923 ntBASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 AC005703.6-201ENST00000623265 1329 ntBASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNIH3Q8TBE1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH3Q8TBE1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms