Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC33.78■■■■□ 3
CFAP43Q8NDM7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
CFAP43Q8NDM7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC33.78■■■■□ 3
CFAP43Q8NDM7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC33.78■■■■□ 3
CFAP43Q8NDM7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
CFAP43Q8NDM7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC33.77■■■■□ 3
CFAP43Q8NDM7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC33.77■■■■□ 3
CFAP43Q8NDM7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC33.77■■■■□ 3
CFAP43Q8NDM7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC33.77■■■■□ 3
CFAP43Q8NDM7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC33.77■■■■□ 3
CFAP43Q8NDM7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC33.77■■■■□ 3
CFAP43Q8NDM7 AC079089.2-201ENST00000531211 1277 ntBASIC33.77■■■■□ 3
CFAP43Q8NDM7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC33.77■■■■□ 3
CFAP43Q8NDM7 AC083880.1-201ENST00000608266 535 ntBASIC33.77■■■■□ 3
CFAP43Q8NDM7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC33.77■■■■□ 3
CFAP43Q8NDM7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
CFAP43Q8NDM7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
CFAP43Q8NDM7 DUSP5P2-201ENST00000426873 1033 ntBASIC33.77■■■■□ 3
CFAP43Q8NDM7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC33.77■■■■□ 3
CFAP43Q8NDM7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC33.77■■■■□ 3
CFAP43Q8NDM7 MIR4758-201ENST00000577688 71 ntBASIC33.77■■■■□ 3
CFAP43Q8NDM7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
CFAP43Q8NDM7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC33.76■■■■□ 3
CFAP43Q8NDM7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
CFAP43Q8NDM7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC33.76■■■■□ 3
CFAP43Q8NDM7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■□□ 2.99
CFAP43Q8NDM7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
CFAP43Q8NDM7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC33.76■■■□□ 2.99
CFAP43Q8NDM7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC33.76■■■□□ 2.99
CFAP43Q8NDM7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
CFAP43Q8NDM7 PPP1R14BP2-201ENST00000426284 444 ntBASIC33.76■■■□□ 2.99
CFAP43Q8NDM7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC33.76■■■□□ 2.99
CFAP43Q8NDM7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC33.76■■■□□ 2.99
CFAP43Q8NDM7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■□□ 2.99
CFAP43Q8NDM7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
CFAP43Q8NDM7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
CFAP43Q8NDM7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC33.76■■■□□ 2.99
CFAP43Q8NDM7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
CFAP43Q8NDM7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC33.75■■■□□ 2.99
CFAP43Q8NDM7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
CFAP43Q8NDM7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC33.75■■■□□ 2.99
CFAP43Q8NDM7 ADM-205ENST00000528544 586 ntTSL 2 BASIC33.75■■■□□ 2.99
CFAP43Q8NDM7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
CFAP43Q8NDM7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
CFAP43Q8NDM7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
CFAP43Q8NDM7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
CFAP43Q8NDM7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 LINC00526-201ENST00000581067 1875 ntBASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 AC087742.1-201ENST00000575880 1738 ntBASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 AC013268.1-206ENST00000638368 961 ntBASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 AC112229.1-201ENST00000639295 961 ntBASIC33.74■■■□□ 2.99
CFAP43Q8NDM7 AP006587.3-201ENST00000525742 1516 ntBASIC33.73■■■□□ 2.99
CFAP43Q8NDM7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC33.73■■■□□ 2.99
CFAP43Q8NDM7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
CFAP43Q8NDM7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
CFAP43Q8NDM7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC33.72■■■□□ 2.99
CFAP43Q8NDM7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC33.72■■■□□ 2.99
CFAP43Q8NDM7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
CFAP43Q8NDM7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
CFAP43Q8NDM7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
CFAP43Q8NDM7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
CFAP43Q8NDM7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC33.72■■■□□ 2.99
CFAP43Q8NDM7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC33.72■■■□□ 2.99
CFAP43Q8NDM7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC33.71■■■□□ 2.99
CFAP43Q8NDM7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC33.71■■■□□ 2.99
CFAP43Q8NDM7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
CFAP43Q8NDM7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
CFAP43Q8NDM7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC33.71■■■□□ 2.99
CFAP43Q8NDM7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
CFAP43Q8NDM7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
CFAP43Q8NDM7 AC009237.3-201ENST00000393279 1427 ntBASIC33.71■■■□□ 2.99
CFAP43Q8NDM7 AC010141.2-201ENST00000452426 721 ntBASIC33.71■■■□□ 2.99
CFAP43Q8NDM7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC33.71■■■□□ 2.99
CFAP43Q8NDM7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 MKRN4P-201ENST00000444706 1521 ntBASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 AC055733.4-201ENST00000638462 1354 ntBASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 AL034346.1-201ENST00000568244 1277 ntBASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
CFAP43Q8NDM7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.98
CFAP43Q8NDM7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC33.7■■■□□ 2.98
CFAP43Q8NDM7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC33.7■■■□□ 2.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms