Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Sf3a1Q8K4Z5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sf3a1Q8K4Z5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sf3a1Q8K4Z5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.09■■□□□ 1.29
Sf3a1Q8K4Z5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sf3a1Q8K4Z5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Sf3a1Q8K4Z5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sf3a1Q8K4Z5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sf3a1Q8K4Z5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Sf3a1Q8K4Z5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sf3a1Q8K4Z5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
Sf3a1Q8K4Z5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
Sf3a1Q8K4Z5 Gm13534-201ENSMUST00000121169 513 ntBASIC23.08■■□□□ 1.29
Sf3a1Q8K4Z5 Gm42569-201ENSMUST00000200539 472 ntBASIC23.08■■□□□ 1.29
Sf3a1Q8K4Z5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sf3a1Q8K4Z5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Sf3a1Q8K4Z5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Sf3a1Q8K4Z5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sf3a1Q8K4Z5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sf3a1Q8K4Z5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Sf3a1Q8K4Z5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Sf3a1Q8K4Z5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Sf3a1Q8K4Z5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Sf3a1Q8K4Z5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
Sf3a1Q8K4Z5 Ap3s1-204ENSMUST00000225520 957 ntBASIC23.07■■□□□ 1.28
Sf3a1Q8K4Z5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Sf3a1Q8K4Z5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC23.07■■□□□ 1.28
Sf3a1Q8K4Z5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Sf3a1Q8K4Z5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Sf3a1Q8K4Z5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Sf3a1Q8K4Z5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sf3a1Q8K4Z5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sf3a1Q8K4Z5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC23.06■■□□□ 1.28
Sf3a1Q8K4Z5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sf3a1Q8K4Z5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Sf3a1Q8K4Z5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Sf3a1Q8K4Z5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC23.05■■□□□ 1.28
Sf3a1Q8K4Z5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.05■■□□□ 1.28
Sf3a1Q8K4Z5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Sf3a1Q8K4Z5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC23.05■■□□□ 1.28
Sf3a1Q8K4Z5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
Sf3a1Q8K4Z5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sf3a1Q8K4Z5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sf3a1Q8K4Z5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sf3a1Q8K4Z5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sf3a1Q8K4Z5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Sf3a1Q8K4Z5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Sf3a1Q8K4Z5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23.03■■□□□ 1.28
Sf3a1Q8K4Z5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Sf3a1Q8K4Z5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC23.03■■□□□ 1.28
Sf3a1Q8K4Z5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sf3a1Q8K4Z5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sf3a1Q8K4Z5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC23.03■■□□□ 1.28
Sf3a1Q8K4Z5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sf3a1Q8K4Z5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sf3a1Q8K4Z5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sf3a1Q8K4Z5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23.02■■□□□ 1.28
Sf3a1Q8K4Z5 Gm7514-201ENSMUST00000209475 934 ntBASIC23.02■■□□□ 1.28
Sf3a1Q8K4Z5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sf3a1Q8K4Z5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sf3a1Q8K4Z5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sf3a1Q8K4Z5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sf3a1Q8K4Z5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC23.02■■□□□ 1.28
Sf3a1Q8K4Z5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Sf3a1Q8K4Z5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC23.01■■□□□ 1.27
Sf3a1Q8K4Z5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC23■■□□□ 1.27
Sf3a1Q8K4Z5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Sf3a1Q8K4Z5 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23■■□□□ 1.27
Sf3a1Q8K4Z5 Gm27405-201ENSMUST00000184201 112 ntBASIC23■■□□□ 1.27
Sf3a1Q8K4Z5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC23■■□□□ 1.27
Sf3a1Q8K4Z5 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23■■□□□ 1.27
Sf3a1Q8K4Z5 Gm18688-201ENSMUST00000204695 1859 ntBASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms