Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.23■■□□□ 1.15
Usp44Q8C2S0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Usp44Q8C2S0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Usp44Q8C2S0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Usp44Q8C2S0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Usp44Q8C2S0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Usp44Q8C2S0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Usp44Q8C2S0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Usp44Q8C2S0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.21■■□□□ 1.15
Usp44Q8C2S0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Usp44Q8C2S0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Usp44Q8C2S0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Usp44Q8C2S0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Usp44Q8C2S0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Usp44Q8C2S0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Usp44Q8C2S0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.2■■□□□ 1.15
Usp44Q8C2S0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Usp44Q8C2S0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Usp44Q8C2S0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
Usp44Q8C2S0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Usp44Q8C2S0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Usp44Q8C2S0 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.2■■□□□ 1.14
Usp44Q8C2S0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Usp44Q8C2S0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.19■■□□□ 1.14
Usp44Q8C2S0 AV356131-201ENSMUST00000206201 750 ntBASIC22.19■■□□□ 1.14
Usp44Q8C2S0 Gm18671-201ENSMUST00000214826 683 ntBASIC22.19■■□□□ 1.14
Usp44Q8C2S0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Usp44Q8C2S0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Usp44Q8C2S0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Usp44Q8C2S0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC22.19■■□□□ 1.14
Usp44Q8C2S0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Usp44Q8C2S0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Usp44Q8C2S0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Usp44Q8C2S0 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.19■■□□□ 1.14
Usp44Q8C2S0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Usp44Q8C2S0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Usp44Q8C2S0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.18■■□□□ 1.14
Usp44Q8C2S0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.18■■□□□ 1.14
Usp44Q8C2S0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Usp44Q8C2S0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Usp44Q8C2S0 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.18■■□□□ 1.14
Usp44Q8C2S0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Usp44Q8C2S0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Usp44Q8C2S0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Usp44Q8C2S0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Usp44Q8C2S0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Usp44Q8C2S0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Usp44Q8C2S0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Usp44Q8C2S0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC22.17■■□□□ 1.14
Usp44Q8C2S0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Usp44Q8C2S0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Usp44Q8C2S0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Usp44Q8C2S0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Usp44Q8C2S0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Usp44Q8C2S0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Usp44Q8C2S0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms