Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.81■■□□□ 1.24
DDX53Q86TM3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
DDX53Q86TM3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
DDX53Q86TM3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.81■■□□□ 1.24
DDX53Q86TM3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
DDX53Q86TM3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX53Q86TM3 AC073210.2-201ENST00000430369 194 ntBASIC22.81■■□□□ 1.24
DDX53Q86TM3 AC069152.1-201ENST00000438030 544 ntBASIC22.81■■□□□ 1.24
DDX53Q86TM3 TSPY20P-201ENST00000450910 630 ntBASIC22.81■■□□□ 1.24
DDX53Q86TM3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX53Q86TM3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
DDX53Q86TM3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
DDX53Q86TM3 AC013268.1-206ENST00000638368 961 ntBASIC22.81■■□□□ 1.24
DDX53Q86TM3 AC112229.1-201ENST00000639295 961 ntBASIC22.81■■□□□ 1.24
DDX53Q86TM3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
DDX53Q86TM3 AP006587.3-201ENST00000525742 1516 ntBASIC22.81■■□□□ 1.24
DDX53Q86TM3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
DDX53Q86TM3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.81■■□□□ 1.24
DDX53Q86TM3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX53Q86TM3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX53Q86TM3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX53Q86TM3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX53Q86TM3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX53Q86TM3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.8■■□□□ 1.24
DDX53Q86TM3 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.8■■□□□ 1.24
DDX53Q86TM3 TERF1P5-201ENST00000477545 1207 ntBASIC22.8■■□□□ 1.24
DDX53Q86TM3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.8■■□□□ 1.24
DDX53Q86TM3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.8■■□□□ 1.24
DDX53Q86TM3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
DDX53Q86TM3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.8■■□□□ 1.24
DDX53Q86TM3 AC133041.1-202ENST00000642053 222 ntBASIC22.8■■□□□ 1.24
DDX53Q86TM3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.8■■□□□ 1.24
DDX53Q86TM3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.8■■□□□ 1.24
DDX53Q86TM3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.79■■□□□ 1.24
DDX53Q86TM3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.79■■□□□ 1.24
DDX53Q86TM3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX53Q86TM3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.79■■□□□ 1.24
DDX53Q86TM3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
DDX53Q86TM3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.79■■□□□ 1.24
DDX53Q86TM3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.79■■□□□ 1.24
DDX53Q86TM3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX53Q86TM3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.79■■□□□ 1.24
DDX53Q86TM3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
DDX53Q86TM3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
DDX53Q86TM3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.79■■□□□ 1.24
DDX53Q86TM3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
DDX53Q86TM3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.79■■□□□ 1.24
DDX53Q86TM3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX53Q86TM3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
DDX53Q86TM3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX53Q86TM3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX53Q86TM3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX53Q86TM3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
DDX53Q86TM3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX53Q86TM3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX53Q86TM3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
DDX53Q86TM3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.78■■□□□ 1.24
DDX53Q86TM3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
DDX53Q86TM3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX53Q86TM3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX53Q86TM3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX53Q86TM3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.78■■□□□ 1.24
DDX53Q86TM3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX53Q86TM3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
DDX53Q86TM3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.77■■□□□ 1.24
DDX53Q86TM3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX53Q86TM3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
DDX53Q86TM3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.77■■□□□ 1.24
DDX53Q86TM3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.77■■□□□ 1.24
DDX53Q86TM3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX53Q86TM3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX53Q86TM3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.77■■□□□ 1.24
DDX53Q86TM3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX53Q86TM3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.76■■□□□ 1.23
DDX53Q86TM3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
DDX53Q86TM3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.76■■□□□ 1.23
DDX53Q86TM3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.76■■□□□ 1.23
DDX53Q86TM3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.76■■□□□ 1.23
DDX53Q86TM3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX53Q86TM3 AC068338.2-201ENST00000563278 1430 ntBASIC22.75■■□□□ 1.23
DDX53Q86TM3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
DDX53Q86TM3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX53Q86TM3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX53Q86TM3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX53Q86TM3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.75■■□□□ 1.23
DDX53Q86TM3 AC007322.4-201ENST00000509611 723 ntBASIC22.75■■□□□ 1.23
DDX53Q86TM3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.75■■□□□ 1.23
DDX53Q86TM3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.75■■□□□ 1.23
DDX53Q86TM3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.75■■□□□ 1.23
DDX53Q86TM3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX53Q86TM3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.75■■□□□ 1.23
DDX53Q86TM3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
DDX53Q86TM3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
DDX53Q86TM3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
DDX53Q86TM3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.74■■□□□ 1.23
DDX53Q86TM3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX53Q86TM3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX53Q86TM3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX53Q86TM3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.73■■□□□ 1.23
DDX53Q86TM3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms