Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trim50Q810I2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim50Q810I2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim50Q810I2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.4■□□□□ 0.54
Trim50Q810I2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim50Q810I2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim50Q810I2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim50Q810I2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim50Q810I2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim50Q810I2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim50Q810I2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim50Q810I2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim50Q810I2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.4■□□□□ 0.54
Trim50Q810I2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim50Q810I2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim50Q810I2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim50Q810I2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim50Q810I2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim50Q810I2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim50Q810I2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim50Q810I2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim50Q810I2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim50Q810I2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trim50Q810I2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trim50Q810I2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim50Q810I2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim50Q810I2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim50Q810I2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim50Q810I2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.39■□□□□ 0.53
Trim50Q810I2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim50Q810I2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim50Q810I2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim50Q810I2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim50Q810I2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.38■□□□□ 0.53
Trim50Q810I2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Trim50Q810I2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Trim50Q810I2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.38■□□□□ 0.53
Trim50Q810I2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim50Q810I2 Gm38205-201ENSMUST00000192243 258 ntBASIC18.38■□□□□ 0.53
Trim50Q810I2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.38■□□□□ 0.53
Trim50Q810I2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.38■□□□□ 0.53
Trim50Q810I2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Trim50Q810I2 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.38■□□□□ 0.53
Trim50Q810I2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim50Q810I2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim50Q810I2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim50Q810I2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim50Q810I2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim50Q810I2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim50Q810I2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim50Q810I2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim50Q810I2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim50Q810I2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim50Q810I2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim50Q810I2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim50Q810I2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim50Q810I2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim50Q810I2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim50Q810I2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim50Q810I2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim50Q810I2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.36■□□□□ 0.53
Trim50Q810I2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim50Q810I2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trim50Q810I2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim50Q810I2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim50Q810I2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim50Q810I2 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.36■□□□□ 0.53
Trim50Q810I2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim50Q810I2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim50Q810I2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim50Q810I2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim50Q810I2 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.35■□□□□ 0.53
Trim50Q810I2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim50Q810I2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim50Q810I2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim50Q810I2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim50Q810I2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim50Q810I2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim50Q810I2 Gm9988-201ENSMUST00000069786 435 ntBASIC18.35■□□□□ 0.53
Trim50Q810I2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trim50Q810I2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim50Q810I2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim50Q810I2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim50Q810I2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim50Q810I2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim50Q810I2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim50Q810I2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim50Q810I2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim50Q810I2 Iqck-206ENSMUST00000208658 2891 ntBASIC18.34■□□□□ 0.53
Trim50Q810I2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.34■□□□□ 0.53
Trim50Q810I2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim50Q810I2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim50Q810I2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim50Q810I2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
Trim50Q810I2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim50Q810I2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim50Q810I2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim50Q810I2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim50Q810I2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim50Q810I2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms