Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timd4Q6U7R4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Timd4Q6U7R4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Timd4Q6U7R4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timd4Q6U7R4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timd4Q6U7R4 Gm13146-201ENSMUST00000118508 780 ntBASIC17.57■□□□□ 0.4
Timd4Q6U7R4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.57■□□□□ 0.4
Timd4Q6U7R4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.57■□□□□ 0.4
Timd4Q6U7R4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timd4Q6U7R4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timd4Q6U7R4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.57■□□□□ 0.4
Timd4Q6U7R4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timd4Q6U7R4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 AV356131-201ENSMUST00000206201 750 ntBASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timd4Q6U7R4 BC021767-201ENSMUST00000126387 1716 ntBASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Gm42569-201ENSMUST00000200539 472 ntBASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.55■□□□□ 0.4
Timd4Q6U7R4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timd4Q6U7R4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timd4Q6U7R4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Timd4Q6U7R4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Timd4Q6U7R4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Timd4Q6U7R4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Timd4Q6U7R4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Timd4Q6U7R4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Timd4Q6U7R4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Timd4Q6U7R4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Timd4Q6U7R4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Timd4Q6U7R4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Timd4Q6U7R4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Timd4Q6U7R4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Timd4Q6U7R4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Timd4Q6U7R4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Timd4Q6U7R4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.51■□□□□ 0.39
Timd4Q6U7R4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Timd4Q6U7R4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Timd4Q6U7R4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Timd4Q6U7R4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Timd4Q6U7R4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.51■□□□□ 0.39
Timd4Q6U7R4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Timd4Q6U7R4 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.51■□□□□ 0.39
Timd4Q6U7R4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Timd4Q6U7R4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Timd4Q6U7R4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Timd4Q6U7R4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms