Protein–RNA interactions for Protein: Q3UR70

Tgfbrap1, Transforming growth factor-beta receptor-associated protein 1, mousemouse

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbrap1Q3UR70 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbrap1Q3UR70 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbrap1Q3UR70 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbrap1Q3UR70 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbrap1Q3UR70 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbrap1Q3UR70 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbrap1Q3UR70 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.53■□□□□ 0.88
Tgfbrap1Q3UR70 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbrap1Q3UR70 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.53■□□□□ 0.88
Tgfbrap1Q3UR70 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbrap1Q3UR70 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbrap1Q3UR70 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tgfbrap1Q3UR70 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.52■□□□□ 0.88
Tgfbrap1Q3UR70 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tgfbrap1Q3UR70 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tgfbrap1Q3UR70 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tgfbrap1Q3UR70 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tgfbrap1Q3UR70 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Tgfbrap1Q3UR70 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Tgfbrap1Q3UR70 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tgfbrap1Q3UR70 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbrap1Q3UR70 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbrap1Q3UR70 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbrap1Q3UR70 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbrap1Q3UR70 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbrap1Q3UR70 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbrap1Q3UR70 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbrap1Q3UR70 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbrap1Q3UR70 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbrap1Q3UR70 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbrap1Q3UR70 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbrap1Q3UR70 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbrap1Q3UR70 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbrap1Q3UR70 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbrap1Q3UR70 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbrap1Q3UR70 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.5■□□□□ 0.87
Tgfbrap1Q3UR70 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.5■□□□□ 0.87
Tgfbrap1Q3UR70 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbrap1Q3UR70 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tgfbrap1Q3UR70 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Tgfbrap1Q3UR70 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbrap1Q3UR70 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbrap1Q3UR70 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbrap1Q3UR70 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbrap1Q3UR70 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbrap1Q3UR70 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbrap1Q3UR70 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfbrap1Q3UR70 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfbrap1Q3UR70 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.49■□□□□ 0.87
Tgfbrap1Q3UR70 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfbrap1Q3UR70 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.49■□□□□ 0.87
Tgfbrap1Q3UR70 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.49■□□□□ 0.87
Tgfbrap1Q3UR70 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.49■□□□□ 0.87
Tgfbrap1Q3UR70 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfbrap1Q3UR70 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfbrap1Q3UR70 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tgfbrap1Q3UR70 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tgfbrap1Q3UR70 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.48■□□□□ 0.87
Tgfbrap1Q3UR70 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Tgfbrap1Q3UR70 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Tgfbrap1Q3UR70 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tgfbrap1Q3UR70 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.48■□□□□ 0.87
Tgfbrap1Q3UR70 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.48■□□□□ 0.87
Tgfbrap1Q3UR70 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tgfbrap1Q3UR70 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tgfbrap1Q3UR70 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tgfbrap1Q3UR70 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tgfbrap1Q3UR70 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Tgfbrap1Q3UR70 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tgfbrap1Q3UR70 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tgfbrap1Q3UR70 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tgfbrap1Q3UR70 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Tgfbrap1Q3UR70 Gm6211-202ENSMUST00000167849 925 ntBASIC20.46■□□□□ 0.87
Tgfbrap1Q3UR70 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tgfbrap1Q3UR70 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.46■□□□□ 0.87
Tgfbrap1Q3UR70 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.46■□□□□ 0.87
Tgfbrap1Q3UR70 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tgfbrap1Q3UR70 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tgfbrap1Q3UR70 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Tgfbrap1Q3UR70 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tgfbrap1Q3UR70 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Gm7290-201ENSMUST00000104990 617 ntBASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Gm12918-201ENSMUST00000120234 636 ntBASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Gm15710-201ENSMUST00000121821 636 ntBASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Gm5075-201ENSMUST00000196916 622 ntBASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbrap1Q3UR70 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms