Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH13P55290 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH13P55290 OXCT2P1-201ENST00000447263 1535 ntBASIC20.9■□□□□ 0.94
CDH13P55290 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH13P55290 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH13P55290 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH13P55290 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH13P55290 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
CDH13P55290 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH13P55290 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH13P55290 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH13P55290 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH13P55290 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH13P55290 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH13P55290 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH13P55290 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CDH13P55290 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH13P55290 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH13P55290 FEM1AP4-201ENST00000443167 1987 ntBASIC20.89■□□□□ 0.93
CDH13P55290 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH13P55290 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH13P55290 AC131281.2-201ENST00000520478 145 ntBASIC20.89■□□□□ 0.93
CDH13P55290 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH13P55290 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH13P55290 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH13P55290 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CDH13P55290 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH13P55290 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH13P55290 AL024507.2-201ENST00000606070 2574 ntBASIC20.89■□□□□ 0.93
CDH13P55290 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH13P55290 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH13P55290 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CDH13P55290 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH13P55290 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CDH13P55290 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH13P55290 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH13P55290 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CDH13P55290 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH13P55290 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH13P55290 AL138724.1-201ENST00000606771 1088 ntBASIC20.88■□□□□ 0.93
CDH13P55290 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CDH13P55290 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CDH13P55290 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH13P55290 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CDH13P55290 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH13P55290 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH13P55290 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH13P55290 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH13P55290 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH13P55290 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH13P55290 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDH13P55290 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH13P55290 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH13P55290 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH13P55290 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH13P55290 DUX4L19-201ENST00000557448 1267 ntBASIC20.87■□□□□ 0.93
CDH13P55290 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH13P55290 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH13P55290 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH13P55290 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH13P55290 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH13P55290 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH13P55290 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH13P55290 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CDH13P55290 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH13P55290 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH13P55290 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH13P55290 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH13P55290 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH13P55290 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH13P55290 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CDH13P55290 SLC47A1P1-202ENST00000449666 945 ntBASIC20.86■□□□□ 0.93
CDH13P55290 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.86■□□□□ 0.93
CDH13P55290 AC136469.2-201ENST00000623944 1028 ntBASIC20.86■□□□□ 0.93
CDH13P55290 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CDH13P55290 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH13P55290 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH13P55290 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH13P55290 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH13P55290 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH13P55290 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH13P55290 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
CDH13P55290 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH13P55290 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDH13P55290 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH13P55290 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH13P55290 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.85■□□□□ 0.93
CDH13P55290 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.85■□□□□ 0.93
CDH13P55290 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH13P55290 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CDH13P55290 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.85■□□□□ 0.93
CDH13P55290 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.85■□□□□ 0.93
CDH13P55290 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH13P55290 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH13P55290 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CDH13P55290 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH13P55290 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH13P55290 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CDH13P55290 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CDH13P55290 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms