Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Xcl1P47993 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Xcl1P47993 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Xcl1P47993 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Xcl1P47993 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Xcl1P47993 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Xcl1P47993 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.4□□□□□ -0.42
Xcl1P47993 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Xcl1P47993 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Xcl1P47993 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.4□□□□□ -0.42
Xcl1P47993 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Xcl1P47993 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Xcl1P47993 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Xcl1P47993 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Xcl1P47993 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.4□□□□□ -0.42
Xcl1P47993 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Xcl1P47993 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC12.4□□□□□ -0.42
Xcl1P47993 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Xcl1P47993 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Xcl1P47993 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Xcl1P47993 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.4□□□□□ -0.42
Xcl1P47993 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Xcl1P47993 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.4□□□□□ -0.43
Xcl1P47993 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.39□□□□□ -0.43
Xcl1P47993 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Xcl1P47993 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC12.39□□□□□ -0.43
Xcl1P47993 AC122317.2-201ENSMUST00000218708 1248 ntBASIC12.39□□□□□ -0.43
Xcl1P47993 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Xcl1P47993 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC12.39□□□□□ -0.43
Xcl1P47993 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Xcl1P47993 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.39□□□□□ -0.43
Xcl1P47993 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Xcl1P47993 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Xcl1P47993 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Xcl1P47993 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Xcl1P47993 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.38□□□□□ -0.43
Xcl1P47993 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.38□□□□□ -0.43
Xcl1P47993 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Xcl1P47993 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Xcl1P47993 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Xcl1P47993 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Xcl1P47993 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.37□□□□□ -0.43
Xcl1P47993 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC12.37□□□□□ -0.43
Xcl1P47993 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC12.37□□□□□ -0.43
Xcl1P47993 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Xcl1P47993 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Xcl1P47993 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Xcl1P47993 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Xcl1P47993 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.36□□□□□ -0.43
Xcl1P47993 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Xcl1P47993 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms