Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 tL(CAA)DtL(CAA)D 82 nt3.54□□□□□ -1.84
VPS52P39904 tL(CAA)G1tL(CAA)G1 82 nt3.54□□□□□ -1.84
VPS52P39904 SUP54tL(CAA)G2 82 nt3.54□□□□□ -1.84
VPS52P39904 tL(CAA)G3tL(CAA)G3 82 nt3.54□□□□□ -1.84
VPS52P39904 tL(CAA)KtL(CAA)K 82 nt3.54□□□□□ -1.84
VPS52P39904 tL(CAA)LtL(CAA)L 82 nt3.54□□□□□ -1.84
VPS52P39904 tL(CAA)MtL(CAA)M 82 nt3.54□□□□□ -1.84
VPS52P39904 tL(CAA)NtL(CAA)N 82 nt3.54□□□□□ -1.84
VPS52P39904 SVP26YHR181W 687 nt3.54□□□□□ -1.84
VPS52P39904 YAL034C-BYAL034C-B 354 nt3.54□□□□□ -1.84
VPS52P39904 YJR112W-AYJR112W-A 330 nt3.54□□□□□ -1.84
VPS52P39904 PIR3YKL163W 978 nt3.54□□□□□ -1.84
VPS52P39904 NBP1YLR457C 960 nt3.54□□□□□ -1.84
VPS52P39904 TEM1YML064C 738 nt3.54□□□□□ -1.84
VPS52P39904 DLT1YMR126C 1029 nt3.54□□□□□ -1.84
VPS52P39904 RPB2YOR151C 3675 nt3.54□□□□□ -1.84
VPS52P39904 BUD5YCR038C 1929 nt3.54□□□□□ -1.84
VPS52P39904 UBX5YDR330W 1503 nt3.54□□□□□ -1.84
VPS52P39904 DSE1YER124C 1722 nt3.53□□□□□ -1.84
VPS52P39904 TSC13YDL015C 933 nt3.53□□□□□ -1.84
VPS52P39904 YDR042CYDR042C 603 nt3.53□□□□□ -1.84
VPS52P39904 YDR355CYDR355C 303 nt3.53□□□□□ -1.84
VPS52P39904 YDR535CYDR535C 501 nt3.53□□□□□ -1.84
VPS52P39904 MAG1YER142C 891 nt3.53□□□□□ -1.84
VPS52P39904 YGL041W-AYGL041W-A 465 nt3.53□□□□□ -1.84
VPS52P39904 SGN1YIR001C 753 nt3.53□□□□□ -1.84
VPS52P39904 RCN1YKL159C 636 nt3.53□□□□□ -1.84
VPS52P39904 YGK3YOL128C 1128 nt3.53□□□□□ -1.84
VPS52P39904 YAR1YPL239W 603 nt3.53□□□□□ -1.84
VPS52P39904 PBP2YBR233W 1242 nt3.53□□□□□ -1.84
VPS52P39904 YBR287WYBR287W 1284 nt3.53□□□□□ -1.84
VPS52P39904 GPI10YGL142C 1851 nt3.53□□□□□ -1.84
VPS52P39904 MLH2YLR035C 2088 nt3.53□□□□□ -1.84
VPS52P39904 MTC4YBR255W 2085 nt3.53□□□□□ -1.84
VPS52P39904 ABP140YOR239W 1887 nt3.52□□□□□ -1.85
VPS52P39904 GRX3YDR098C 858 nt3.52□□□□□ -1.85
VPS52P39904 HTB1YDR224C 396 nt3.52□□□□□ -1.85
VPS52P39904 YGR026WYGR026W 837 nt3.52□□□□□ -1.85
VPS52P39904 COX2Q0250 756 nt3.52□□□□□ -1.85
VPS52P39904 SUB1YMR039C 879 nt3.52□□□□□ -1.85
VPS52P39904 MOH1YBL049W 417 nt3.52□□□□□ -1.85
VPS52P39904 ARO1YDR127W 4767 nt3.52□□□□□ -1.85
VPS52P39904 CUE3YGL110C 1875 nt3.52□□□□□ -1.85
VPS52P39904 MSS4YDR208W 2340 nt3.52□□□□□ -1.85
VPS52P39904 SDS23YGL056C 1584 nt3.51□□□□□ -1.85
VPS52P39904 FMP25YLR077W 1752 nt3.51□□□□□ -1.85
VPS52P39904 MTH1YDR277C 1302 nt3.51□□□□□ -1.85
VPS52P39904 PRP11YDL043C 801 nt3.51□□□□□ -1.85
VPS52P39904 SPO73YER046W 432 nt3.51□□□□□ -1.85
VPS52P39904 OTU1YFL044C 906 nt3.51□□□□□ -1.85
VPS52P39904 YGL242CYGL242C 546 nt3.51□□□□□ -1.85
VPS52P39904 RIM4YHL024W 2142 nt3.51□□□□□ -1.85
VPS52P39904 YNR025CYNR025C 360 nt3.51□□□□□ -1.85
VPS52P39904 TRM112YNR046W 408 nt3.51□□□□□ -1.85
VPS52P39904 YBR096WYBR096W 693 nt3.51□□□□□ -1.85
VPS52P39904 YBR103C-AYBR103C-A 144 nt3.51□□□□□ -1.85
VPS52P39904 PPQ1YPL179W 1650 nt3.51□□□□□ -1.85
VPS52P39904 YPR003CYPR003C 2265 nt3.51□□□□□ -1.85
VPS52P39904 ROD1YOR018W 2514 nt3.5□□□□□ -1.85
VPS52P39904 YDR261W-AYDR261W-A 1317 nt3.5□□□□□ -1.85
VPS52P39904 VPS27YNR006W 1869 nt3.5□□□□□ -1.85
VPS52P39904 AIM22YJL046W 1230 nt3.5□□□□□ -1.85
VPS52P39904 YPT6YLR262C 648 nt3.5□□□□□ -1.85
VPS52P39904 FIG1YBR040W 897 nt3.5□□□□□ -1.85
VPS52P39904 MRPS9YBR146W 837 nt3.5□□□□□ -1.85
VPS52P39904 RGI1YER067W 486 nt3.49□□□□□ -1.85
VPS52P39904 YER076CYER076C 909 nt3.49□□□□□ -1.85
VPS52P39904 RPS25AYGR027C 327 nt3.49□□□□□ -1.85
VPS52P39904 DOG2YHR043C 741 nt3.49□□□□□ -1.85
VPS52P39904 DOG1YHR044C 741 nt3.49□□□□□ -1.85
VPS52P39904 DPH1YIL103W 1278 nt3.49□□□□□ -1.85
VPS52P39904 ECM9YKR004C 1134 nt3.49□□□□□ -1.85
VPS52P39904 TPT1YOL102C 693 nt3.49□□□□□ -1.85
VPS52P39904 YOR366WYOR366W 354 nt3.49□□□□□ -1.85
VPS52P39904 SUR1YPL057C 1149 nt3.49□□□□□ -1.85
VPS52P39904 PPT2YPL148C 522 nt3.49□□□□□ -1.85
VPS52P39904 CUP9YPL177C 921 nt3.49□□□□□ -1.85
VPS52P39904 SSU1YPL092W 1377 nt3.49□□□□□ -1.85
VPS52P39904 YGL176CYGL176C 1665 nt3.49□□□□□ -1.85
VPS52P39904 AAD3YCR107W 1092 nt3.48□□□□□ -1.85
VPS52P39904 YLR271WYLR271W 825 nt3.48□□□□□ -1.85
VPS52P39904 REH1YLR387C 1299 nt3.48□□□□□ -1.85
VPS52P39904 NRK1YNL129W 723 nt3.48□□□□□ -1.85
VPS52P39904 NOG1YPL093W 1944 nt3.48□□□□□ -1.85
VPS52P39904 CTM1YHR109W 1758 nt3.48□□□□□ -1.85
VPS52P39904 DSN1YIR010W 1731 nt3.47□□□□□ -1.85
VPS52P39904 GAC1YOR178C 2382 nt3.47□□□□□ -1.85
VPS52P39904 POL1YNL102W 4407 nt3.47□□□□□ -1.85
VPS52P39904 ARP9YMR033W 1404 nt3.47□□□□□ -1.85
VPS52P39904 ROK1YGL171W 1695 nt3.47□□□□□ -1.85
VPS52P39904 RPL13AYDL082W 600 nt3.47□□□□□ -1.85
VPS52P39904 APA2YDR530C 978 nt3.47□□□□□ -1.85
VPS52P39904 FMP10YER182W 735 nt3.47□□□□□ -1.85
VPS52P39904 THP2YHR167W 786 nt3.47□□□□□ -1.85
VPS52P39904 YKL091CYKL091C 933 nt3.47□□□□□ -1.85
VPS52P39904 YKL131WYKL131W 522 nt3.47□□□□□ -1.85
VPS52P39904 IDP2YLR174W 1239 nt3.47□□□□□ -1.85
VPS52P39904 YLR428CYLR428C 345 nt3.47□□□□□ -1.85
VPS52P39904 YNL050CYNL050C 813 nt3.47□□□□□ -1.85
VPS52P39904 YOR186WYOR186W 435 nt3.47□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 17.7 ms