Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 LINC01960-201ENST00000563759 1884 ntBASIC19.88■□□□□ 0.77
TRIM3O75382 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
TRIM3O75382 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM3O75382 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
TRIM3O75382 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM3O75382 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM3O75382 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.87■□□□□ 0.77
TRIM3O75382 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM3O75382 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM3O75382 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TRIM3O75382 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM3O75382 YBX1P1-201ENST00000445822 960 ntBASIC19.87■□□□□ 0.77
TRIM3O75382 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM3O75382 AC087623.3-201ENST00000607047 1098 ntBASIC19.87■□□□□ 0.77
TRIM3O75382 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM3O75382 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.87■□□□□ 0.77
TRIM3O75382 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM3O75382 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM3O75382 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM3O75382 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TRIM3O75382 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM3O75382 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM3O75382 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM3O75382 MIR5787-201ENST00000611784 55 ntBASIC19.86■□□□□ 0.77
TRIM3O75382 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM3O75382 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TRIM3O75382 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM3O75382 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM3O75382 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TRIM3O75382 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM3O75382 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRIM3O75382 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM3O75382 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM3O75382 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM3O75382 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM3O75382 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM3O75382 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM3O75382 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM3O75382 AC123595.1-201ENST00000440769 1046 ntBASIC19.85■□□□□ 0.77
TRIM3O75382 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM3O75382 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM3O75382 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM3O75382 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.85■□□□□ 0.77
TRIM3O75382 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM3O75382 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM3O75382 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM3O75382 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM3O75382 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM3O75382 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM3O75382 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM3O75382 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRIM3O75382 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM3O75382 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM3O75382 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM3O75382 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM3O75382 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TRIM3O75382 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM3O75382 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM3O75382 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM3O75382 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TRIM3O75382 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM3O75382 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM3O75382 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM3O75382 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM3O75382 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM3O75382 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM3O75382 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM3O75382 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM3O75382 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM3O75382 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM3O75382 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
TRIM3O75382 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRIM3O75382 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM3O75382 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TRIM3O75382 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM3O75382 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
TRIM3O75382 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TRIM3O75382 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TRIM3O75382 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.83■□□□□ 0.77
TRIM3O75382 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM3O75382 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.83■□□□□ 0.77
TRIM3O75382 SMUG1P1-201ENST00000590640 811 ntBASIC19.83■□□□□ 0.77
TRIM3O75382 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM3O75382 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.83■□□□□ 0.76
TRIM3O75382 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM3O75382 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM3O75382 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms