Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.22■□□□□ 0.03
Trbv5A0A0B4J1G9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv5A0A0B4J1G9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv5A0A0B4J1G9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv5A0A0B4J1G9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv5A0A0B4J1G9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv5A0A0B4J1G9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv5A0A0B4J1G9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv5A0A0B4J1G9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv5A0A0B4J1G9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv5A0A0B4J1G9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv5A0A0B4J1G9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv5A0A0B4J1G9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv5A0A0B4J1G9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv5A0A0B4J1G9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv5A0A0B4J1G9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv5A0A0B4J1G9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trbv5A0A0B4J1G9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv5A0A0B4J1G9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.17■□□□□ 0.02
Trbv5A0A0B4J1G9 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.17■□□□□ 0.02
Trbv5A0A0B4J1G9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms