Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-7A0A075B6A6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-7A0A075B6A6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-7A0A075B6A6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav6n-7A0A075B6A6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-7A0A075B6A6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav6n-7A0A075B6A6 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.03■□□□□ 0.16
Trav6n-7A0A075B6A6 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.03■□□□□ 0.16
Trav6n-7A0A075B6A6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav6n-7A0A075B6A6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-7A0A075B6A6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-7A0A075B6A6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-7A0A075B6A6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav6n-7A0A075B6A6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-7A0A075B6A6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav6n-7A0A075B6A6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-7A0A075B6A6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-7A0A075B6A6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-7A0A075B6A6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-7A0A075B6A6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-7A0A075B6A6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav6n-7A0A075B6A6 Gm10033-202ENSMUST00000211874 928 ntBASIC16.02■□□□□ 0.16
Trav6n-7A0A075B6A6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav6n-7A0A075B6A6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-7A0A075B6A6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-7A0A075B6A6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.02■□□□□ 0.15
Trav6n-7A0A075B6A6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6n-7A0A075B6A6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-7A0A075B6A6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-7A0A075B6A6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav6n-7A0A075B6A6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-7A0A075B6A6 Gm13146-201ENSMUST00000118508 780 ntBASIC16■□□□□ 0.15
Trav6n-7A0A075B6A6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Trav6n-7A0A075B6A6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16■□□□□ 0.15
Trav6n-7A0A075B6A6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-7A0A075B6A6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-7A0A075B6A6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Trav6n-7A0A075B6A6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-7A0A075B6A6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-7A0A075B6A6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav6n-7A0A075B6A6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 AV356131-201ENSMUST00000206201 750 ntBASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-7A0A075B6A6 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Gm26571-201ENSMUST00000181399 666 ntBASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms