Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7n-4A0A075B620 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7n-4A0A075B620 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7n-4A0A075B620 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7n-4A0A075B620 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7n-4A0A075B620 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav7n-4A0A075B620 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav7n-4A0A075B620 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav7n-4A0A075B620 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav7n-4A0A075B620 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav7n-4A0A075B620 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav7n-4A0A075B620 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav7n-4A0A075B620 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7n-4A0A075B620 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Gm10399-202ENSMUST00000202768 748 ntBASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav7n-4A0A075B620 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-4A0A075B620 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 Gm10420-201ENSMUST00000121713 882 ntBASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms