Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 LRRC8A-202ENST00000372599 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 SPRY4-201ENST00000344120 4938 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 AC007741.1-201ENST00000623818 3495 ntBASIC12.49□□□□□ -0.41
LMO3Q8TAP4 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 MAPK10-262ENST00000641051 5738 ntBASIC12.49□□□□□ -0.41
LMO3Q8TAP4 USP32-202ENST00000393003 1868 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 ATN1-202ENST00000396684 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 PSTPIP2-201ENST00000409746 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 ZNF141-201ENST00000240499 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 MKRN7P-202ENST00000640520 1765 ntTSL 5 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 BZW2-214ENST00000630952 1721 ntTSL 5 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 NOP2-223ENST00000620535 2791 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 PDYN-203ENST00000540134 2472 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 MCF2L-202ENST00000375597 3413 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 MAPK10-203ENST00000361569 2434 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 DMC1-201ENST00000216024 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 AC010485.1-201ENST00000589967 1389 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 MEG8-220ENST00000636052 1369 ntTSL 5 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 MYL6B-211ENST00000553066 1305 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 WDR1-204ENST00000499869 3054 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 AC019118.2-202ENST00000419347 416 ntTSL 3 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 AC008073.2-202ENST00000438414 674 ntTSL 3 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 AP001625.1-202ENST00000455116 450 ntTSL 3 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 LINC01270-202ENST00000457853 943 ntTSL 3 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 AC108724.1-201ENST00000481669 352 ntBASIC12.48□□□□□ -0.41
LMO3Q8TAP4 RN7SL766P-201ENST00000494719 309 ntBASIC12.48□□□□□ -0.41
LMO3Q8TAP4 AC079804.3-201ENST00000508367 1000 ntBASIC12.48□□□□□ -0.41
LMO3Q8TAP4 AP003717.2-201ENST00000534962 898 ntBASIC12.48□□□□□ -0.41
LMO3Q8TAP4 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 AL132709.1-205ENST00000556136 551 ntTSL 4 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 AC092769.1-201ENST00000561101 355 ntTSL 3 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 AC023043.1-201ENST00000568654 609 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 AC015849.1-201ENST00000605548 662 ntTSL 3 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 DUXAP10-206ENST00000614614 712 ntTSL 3 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 MIR8083-201ENST00000620823 89 ntBASIC12.48□□□□□ -0.41
LMO3Q8TAP4 LINC01651-201ENST00000624642 350 ntTSL 5 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 ARL14EPL-203ENST00000634632 642 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 SLC1A7-205ENST00000620288 3378 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 FKBP9P1-202ENST00000455909 2451 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 CTAGE16P-201ENST00000435601 2412 ntBASIC12.48□□□□□ -0.41
LMO3Q8TAP4 MELK-209ENST00000541717 2363 ntTSL 2 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 SEMA6A-205ENST00000503865 1678 ntTSL 2 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 STX16-205ENST00000361830 4318 ntTSL 5 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 MORC2-AS1-201ENST00000422995 2274 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC12.48□□□□□ -0.41
LMO3Q8TAP4 LHX6-203ENST00000373755 3384 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 MORC1-201ENST00000232603 3764 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 AL357140.3-201ENST00000639753 1983 ntBASIC12.47□□□□□ -0.41
LMO3Q8TAP4 TCF19-201ENST00000376255 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 BTNL3-201ENST00000342868 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 RPH3A-213ENST00000548866 2429 ntTSL 2 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 WSB2-203ENST00000535496 1328 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 FOXP1-205ENST00000468577 1842 ntTSL 5 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 SNAPC5-202ENST00000316634 1002 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 MAPT-202ENST00000334239 1107 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 KRT41P-201ENST00000393988 1293 ntBASIC12.47□□□□□ -0.41
LMO3Q8TAP4 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 CALN1-205ENST00000431984 777 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 RBMX2P3-201ENST00000450122 957 ntBASIC12.47□□□□□ -0.41
LMO3Q8TAP4 TRAPPC12-AS1-201ENST00000453806 908 ntTSL 3 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 AC119749.1-201ENST00000454884 691 ntBASIC12.47□□□□□ -0.41
LMO3Q8TAP4 RPSAP69-202ENST00000456555 883 ntBASIC12.47□□□□□ -0.41
LMO3Q8TAP4 AL390061.1-201ENST00000457804 293 ntTSL 2 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 AC073517.1-201ENST00000468165 541 ntTSL 4 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 ITIH4-AS1-201ENST00000478366 395 ntTSL 3 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 DLEU1-232ENST00000491341 1141 ntTSL 5 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 HTR4-210ENST00000521735 1242 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 AC008446.1-201ENST00000522454 451 ntBASIC12.47□□□□□ -0.41
LMO3Q8TAP4 ACP2-209ENST00000530453 826 ntTSL 2 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 EIF3J-AS1-204ENST00000560049 639 ntTSL 2 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 AC027237.4-201ENST00000560870 694 ntTSL 3 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 AC124312.3-201ENST00000567527 1236 ntBASIC12.47□□□□□ -0.41
LMO3Q8TAP4 SLC25A1P5-201ENST00000587610 783 ntBASIC12.47□□□□□ -0.41
LMO3Q8TAP4 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC12.47□□□□□ -0.41
LMO3Q8TAP4 GH2-205ENST00000622506 702 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms