Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RCBTB2P1-201ENST00000453021 1462 ntBASIC12.36□□□□□ -0.43
SLC1A1P43005 EDAR-201ENST00000258443 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 BTNL2-201ENST00000374993 1368 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SLC1A1P43005 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC12.36□□□□□ -0.43
SLC1A1P43005 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC12.36□□□□□ -0.43
SLC1A1P43005 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 ADAM2-203ENST00000379853 2125 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SLC1A1P43005 LINC01849-201ENST00000414647 517 ntTSL 4 BASIC12.36□□□□□ -0.43
SLC1A1P43005 AC074019.1-201ENST00000428788 1096 ntBASIC12.36□□□□□ -0.43
SLC1A1P43005 TGIF2P1-201ENST00000435390 685 ntBASIC12.36□□□□□ -0.43
SLC1A1P43005 OR4C14P-201ENST00000440929 923 ntBASIC12.36□□□□□ -0.43
SLC1A1P43005 AC096536.2-201ENST00000450503 343 ntTSL 2 BASIC12.36□□□□□ -0.43
SLC1A1P43005 HNRNPA1P9-201ENST00000450624 950 ntBASIC12.36□□□□□ -0.43
SLC1A1P43005 RN7SL110P-201ENST00000498222 283 ntBASIC12.36□□□□□ -0.43
SLC1A1P43005 AC002070.1-203ENST00000509470 695 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 AC245884.7-201ENST00000514037 356 ntBASIC12.36□□□□□ -0.43
SLC1A1P43005 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC12.36□□□□□ -0.43
SLC1A1P43005 OR7E14P-201ENST00000526721 1000 ntBASIC12.36□□□□□ -0.43
SLC1A1P43005 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC12.36□□□□□ -0.43
SLC1A1P43005 AC015712.1-204ENST00000558254 755 ntTSL 3 BASIC12.36□□□□□ -0.43
SLC1A1P43005 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 AP002414.5-201ENST00000591853 258 ntTSL 4 BASIC12.36□□□□□ -0.43
SLC1A1P43005 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC12.36□□□□□ -0.43
SLC1A1P43005 SMIM17-202ENST00000600547 573 ntTSL 4 BASIC12.36□□□□□ -0.43
SLC1A1P43005 U62317.4-201ENST00000609758 448 ntBASIC12.36□□□□□ -0.43
SLC1A1P43005 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC12.36□□□□□ -0.43
SLC1A1P43005 HIST1H2APS4-202ENST00000635537 681 ntBASIC12.36□□□□□ -0.43
SLC1A1P43005 AC011591.2-201ENST00000636637 786 ntBASIC12.36□□□□□ -0.43
SLC1A1P43005 BCL6-206ENST00000450123 2003 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 SPDL1-201ENST00000265295 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 NRXN3-218ENST00000635466 5254 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
SLC1A1P43005 C16orf46-201ENST00000299578 1605 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
SLC1A1P43005 HIVEP1-201ENST00000379388 9027 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 HIVEP1-208ENST00000541134 9023 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SLC1A1P43005 DUSP27-203ENST00000443333 4034 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SLC1A1P43005 KCNMA1-289ENST00000640807 3387 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 SLC38A11-201ENST00000303735 3737 ntTSL 2 BASIC12.36□□□□□ -0.43
SLC1A1P43005 ARNT2-201ENST00000303329 6558 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 YEATS4-201ENST00000247843 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 ZNF859P-201ENST00000502859 1966 ntBASIC12.36□□□□□ -0.43
SLC1A1P43005 PCAT1-202ENST00000561978 1992 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 ADAMTS20-202ENST00000395541 4633 ntTSL 5 BASIC12.36□□□□□ -0.43
SLC1A1P43005 MTFR1L-210ENST00000474295 1873 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 RNASE4-202ENST00000555597 1341 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SLC1A1P43005 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SLC1A1P43005 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC12.35□□□□□ -0.43
SLC1A1P43005 ZNF189-203ENST00000374861 3134 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 FAM214B-201ENST00000322813 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 ATXN7L3B-201ENST00000519948 7604 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SLC1A1P43005 ARHGEF26-201ENST00000356448 5254 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SLC1A1P43005 TUBD1-201ENST00000325752 2490 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SLC1A1P43005 HNRNPC-204ENST00000449098 1599 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
SLC1A1P43005 ABI1-204ENST00000376138 3503 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 ILK-215ENST00000537806 1801 ntTSL 5 BASIC12.35□□□□□ -0.43
SLC1A1P43005 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 MIEF1-203ENST00000404569 3797 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SLC1A1P43005 FLT4-206ENST00000502649 4140 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 WNK4-201ENST00000246914 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 URGCP-205ENST00000443736 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 NCAPG2-201ENST00000356309 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 CD163L1-201ENST00000313599 4615 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC12.35□□□□□ -0.43
SLC1A1P43005 RAMP2-AS1-205ENST00000592670 3118 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 SLC45A4-202ENST00000517878 3470 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 THAP4-203ENST00000402545 833 ntTSL 5 BASIC12.35□□□□□ -0.43
SLC1A1P43005 MIR1227-201ENST00000408484 88 ntBASIC12.35□□□□□ -0.43
SLC1A1P43005 ATP5G1P4-201ENST00000430660 441 ntBASIC12.35□□□□□ -0.43
SLC1A1P43005 AC005838.1-201ENST00000430712 233 ntBASIC12.35□□□□□ -0.43
SLC1A1P43005 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC12.35□□□□□ -0.43
SLC1A1P43005 COQ5-202ENST00000445328 992 ntTSL 2 BASIC12.35□□□□□ -0.43
SLC1A1P43005 AC002472.1-201ENST00000450652 563 ntTSL 4 BASIC12.35□□□□□ -0.43
SLC1A1P43005 AL513366.1-201ENST00000456427 1248 ntBASIC12.35□□□□□ -0.43
SLC1A1P43005 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 AC023906.1-201ENST00000486386 453 ntBASIC12.35□□□□□ -0.43
SLC1A1P43005 AP003692.1-202ENST00000510185 502 ntTSL 3 BASIC12.35□□□□□ -0.43
SLC1A1P43005 TIMM10B-203ENST00000530751 809 ntTSL 2 BASIC12.35□□□□□ -0.43
SLC1A1P43005 MGAT4EP-202ENST00000549576 936 ntBASIC12.35□□□□□ -0.43
SLC1A1P43005 AC064799.2-201ENST00000562681 698 ntTSL 3 BASIC12.35□□□□□ -0.43
SLC1A1P43005 LINC02256-202ENST00000564670 543 ntTSL 4 BASIC12.35□□□□□ -0.43
SLC1A1P43005 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC12.35□□□□□ -0.43
SLC1A1P43005 MED11-203ENST00000575284 652 ntTSL 3 BASIC12.35□□□□□ -0.43
SLC1A1P43005 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 C17orf62-210ENST00000577732 1053 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SLC1A1P43005 AC022382.1-201ENST00000602768 336 ntBASIC12.35□□□□□ -0.43
SLC1A1P43005 AC135983.5-201ENST00000604574 144 ntBASIC12.35□□□□□ -0.43
SLC1A1P43005 AC116036.2-201ENST00000607592 462 ntBASIC12.35□□□□□ -0.43
SLC1A1P43005 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC12.35□□□□□ -0.43
SLC1A1P43005 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC12.35□□□□□ -0.43
SLC1A1P43005 NKAPL-201ENST00000343684 1639 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SLC1A1P43005 TUFT1-204ENST00000392712 2946 ntTSL 5 BASIC12.35□□□□□ -0.43
SLC1A1P43005 ZFP57-203ENST00000488757 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 MPP4-205ENST00000409474 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 SYPL1-201ENST00000011473 2127 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 SIRT5-204ENST00000397350 4382 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SLC1A1P43005 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 366 ms