Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.33■□□□□ 0.68
RCE1Q9Y256 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RCE1Q9Y256 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.33■□□□□ 0.68
RCE1Q9Y256 AC126544.1-201ENST00000580842 1059 ntBASIC19.33■□□□□ 0.68
RCE1Q9Y256 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
RCE1Q9Y256 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RCE1Q9Y256 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RCE1Q9Y256 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCE1Q9Y256 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.32■□□□□ 0.68
RCE1Q9Y256 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCE1Q9Y256 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCE1Q9Y256 SUDS3P1-201ENST00000505831 966 ntBASIC19.32■□□□□ 0.68
RCE1Q9Y256 IGHV3-19-201ENST00000521488 291 ntBASIC19.32■□□□□ 0.68
RCE1Q9Y256 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.32■□□□□ 0.68
RCE1Q9Y256 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
RCE1Q9Y256 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCE1Q9Y256 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.32■□□□□ 0.68
RCE1Q9Y256 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCE1Q9Y256 OXCT2P1-201ENST00000447263 1535 ntBASIC19.31■□□□□ 0.68
RCE1Q9Y256 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RCE1Q9Y256 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RCE1Q9Y256 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RCE1Q9Y256 MIR638-201ENST00000385237 100 ntBASIC19.31■□□□□ 0.68
RCE1Q9Y256 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.31■□□□□ 0.68
RCE1Q9Y256 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.31■□□□□ 0.68
RCE1Q9Y256 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RCE1Q9Y256 AL136967.2-201ENST00000623968 743 ntBASIC19.31■□□□□ 0.68
RCE1Q9Y256 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RCE1Q9Y256 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RCE1Q9Y256 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RCE1Q9Y256 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.31■□□□□ 0.68
RCE1Q9Y256 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCE1Q9Y256 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCE1Q9Y256 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCE1Q9Y256 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCE1Q9Y256 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
RCE1Q9Y256 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCE1Q9Y256 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.3■□□□□ 0.68
RCE1Q9Y256 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCE1Q9Y256 AC079089.2-201ENST00000531211 1277 ntBASIC19.3■□□□□ 0.68
RCE1Q9Y256 AC142381.2-201ENST00000566120 298 ntBASIC19.3■□□□□ 0.68
RCE1Q9Y256 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RCE1Q9Y256 AC005837.3-201ENST00000612163 286 ntBASIC19.3■□□□□ 0.68
RCE1Q9Y256 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RCE1Q9Y256 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCE1Q9Y256 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCE1Q9Y256 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCE1Q9Y256 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCE1Q9Y256 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCE1Q9Y256 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCE1Q9Y256 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RCE1Q9Y256 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCE1Q9Y256 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RCE1Q9Y256 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.29■□□□□ 0.68
RCE1Q9Y256 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.29■□□□□ 0.68
RCE1Q9Y256 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RCE1Q9Y256 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.29■□□□□ 0.68
RCE1Q9Y256 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCE1Q9Y256 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RCE1Q9Y256 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.28■□□□□ 0.68
RCE1Q9Y256 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.28■□□□□ 0.68
RCE1Q9Y256 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCE1Q9Y256 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCE1Q9Y256 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.28■□□□□ 0.68
RCE1Q9Y256 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.28■□□□□ 0.68
RCE1Q9Y256 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.28■□□□□ 0.68
RCE1Q9Y256 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.28■□□□□ 0.68
RCE1Q9Y256 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCE1Q9Y256 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.28■□□□□ 0.68
RCE1Q9Y256 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCE1Q9Y256 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCE1Q9Y256 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCE1Q9Y256 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.27■□□□□ 0.68
RCE1Q9Y256 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RCE1Q9Y256 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.27■□□□□ 0.68
RCE1Q9Y256 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCE1Q9Y256 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCE1Q9Y256 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.27■□□□□ 0.68
RCE1Q9Y256 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.27■□□□□ 0.68
RCE1Q9Y256 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RCE1Q9Y256 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RCE1Q9Y256 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.27■□□□□ 0.67
RCE1Q9Y256 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.27■□□□□ 0.67
RCE1Q9Y256 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCE1Q9Y256 AC139530.1-201ENST00000575312 1977 ntBASIC19.26■□□□□ 0.67
RCE1Q9Y256 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCE1Q9Y256 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCE1Q9Y256 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.26■□□□□ 0.67
RCE1Q9Y256 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RCE1Q9Y256 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCE1Q9Y256 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCE1Q9Y256 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RCE1Q9Y256 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCE1Q9Y256 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.26■□□□□ 0.67
RCE1Q9Y256 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCE1Q9Y256 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RCE1Q9Y256 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RCE1Q9Y256 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCE1Q9Y256 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RCE1Q9Y256 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms