Protein–RNA interactions for Protein: Q9UPT9

USP22, Ubiquitin carboxyl-terminal hydrolase 22, humanhuman

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP22Q9UPT9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP22Q9UPT9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.25■□□□□ 0.83
USP22Q9UPT9 MIR4787-201ENST00000607364 84 ntBASIC20.25■□□□□ 0.83
USP22Q9UPT9 AL031602.1-201ENST00000633169 911 ntBASIC20.25■□□□□ 0.83
USP22Q9UPT9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP22Q9UPT9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
USP22Q9UPT9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.25■□□□□ 0.83
USP22Q9UPT9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP22Q9UPT9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP22Q9UPT9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.25■□□□□ 0.83
USP22Q9UPT9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP22Q9UPT9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
USP22Q9UPT9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.24■□□□□ 0.83
USP22Q9UPT9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP22Q9UPT9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.24■□□□□ 0.83
USP22Q9UPT9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP22Q9UPT9 AC239859.2-201ENST00000444165 318 ntBASIC20.24■□□□□ 0.83
USP22Q9UPT9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.24■□□□□ 0.83
USP22Q9UPT9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.24■□□□□ 0.83
USP22Q9UPT9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.24■□□□□ 0.83
USP22Q9UPT9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
USP22Q9UPT9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP22Q9UPT9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP22Q9UPT9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP22Q9UPT9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.23■□□□□ 0.83
USP22Q9UPT9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP22Q9UPT9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.23■□□□□ 0.83
USP22Q9UPT9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP22Q9UPT9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP22Q9UPT9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP22Q9UPT9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.23■□□□□ 0.83
USP22Q9UPT9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.23■□□□□ 0.83
USP22Q9UPT9 AC079089.2-201ENST00000531211 1277 ntBASIC20.23■□□□□ 0.83
USP22Q9UPT9 AC010997.5-201ENST00000609182 354 ntBASIC20.23■□□□□ 0.83
USP22Q9UPT9 PKD1P6-201ENST00000343738 4769 ntBASIC20.23■□□□□ 0.83
USP22Q9UPT9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP22Q9UPT9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP22Q9UPT9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP22Q9UPT9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
USP22Q9UPT9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP22Q9UPT9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP22Q9UPT9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP22Q9UPT9 AC006455.2-201ENST00000429931 906 ntBASIC20.22■□□□□ 0.83
USP22Q9UPT9 TSPY9P-201ENST00000440215 945 ntBASIC20.22■□□□□ 0.83
USP22Q9UPT9 TSPY11P-201ENST00000442607 1045 ntBASIC20.22■□□□□ 0.83
USP22Q9UPT9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP22Q9UPT9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.22■□□□□ 0.83
USP22Q9UPT9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP22Q9UPT9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
USP22Q9UPT9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP22Q9UPT9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP22Q9UPT9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.21■□□□□ 0.83
USP22Q9UPT9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP22Q9UPT9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP22Q9UPT9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP22Q9UPT9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP22Q9UPT9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.21■□□□□ 0.83
USP22Q9UPT9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP22Q9UPT9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.21■□□□□ 0.83
USP22Q9UPT9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.21■□□□□ 0.83
USP22Q9UPT9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
USP22Q9UPT9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP22Q9UPT9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP22Q9UPT9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP22Q9UPT9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.2■□□□□ 0.82
USP22Q9UPT9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP22Q9UPT9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.2■□□□□ 0.82
USP22Q9UPT9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP22Q9UPT9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
USP22Q9UPT9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.2■□□□□ 0.82
USP22Q9UPT9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP22Q9UPT9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
USP22Q9UPT9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.2■□□□□ 0.82
USP22Q9UPT9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP22Q9UPT9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP22Q9UPT9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
USP22Q9UPT9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.2■□□□□ 0.82
USP22Q9UPT9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP22Q9UPT9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP22Q9UPT9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP22Q9UPT9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP22Q9UPT9 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.19■□□□□ 0.82
USP22Q9UPT9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP22Q9UPT9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP22Q9UPT9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP22Q9UPT9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP22Q9UPT9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.19■□□□□ 0.82
USP22Q9UPT9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms