Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 AL136967.2-201ENST00000623968 743 ntBASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDH18Q9HCL0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.15
PCDH18Q9HCL0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
PCDH18Q9HCL0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 AP004607.7-201ENST00000527152 1677 ntBASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 TSPY26P-201ENST00000476365 1326 ntBASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH18Q9HCL0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 RASA4CP-201ENST00000424092 1398 ntBASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 SUDS3P1-201ENST00000505831 966 ntBASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDH18Q9HCL0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH18Q9HCL0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH18Q9HCL0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH18Q9HCL0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH18Q9HCL0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH18Q9HCL0 AC091305.1-201ENST00000479476 895 ntBASIC22.24■■□□□ 1.15
PCDH18Q9HCL0 AL034346.1-201ENST00000568244 1277 ntBASIC22.24■■□□□ 1.15
PCDH18Q9HCL0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH18Q9HCL0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDH18Q9HCL0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH18Q9HCL0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDH18Q9HCL0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH18Q9HCL0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH18Q9HCL0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH18Q9HCL0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH18Q9HCL0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH18Q9HCL0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms