Protein–RNA interactions for Protein: Q96DH6

MSI2, RNA-binding protein Musashi homolog 2, humanhuman

Known RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2Q96DH6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MSI2Q96DH6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.49■□□□□ 0.55
MSI2Q96DH6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MSI2Q96DH6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MSI2Q96DH6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MSI2Q96DH6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.49■□□□□ 0.55
MSI2Q96DH6 AL354811.1-201ENST00000610286 706 ntBASIC18.49■□□□□ 0.55
MSI2Q96DH6 AC092437.1-201ENST00000624794 1048 ntBASIC18.49■□□□□ 0.55
MSI2Q96DH6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.49■□□□□ 0.55
MSI2Q96DH6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MSI2Q96DH6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.49■□□□□ 0.55
MSI2Q96DH6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MSI2Q96DH6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.49■□□□□ 0.55
MSI2Q96DH6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MSI2Q96DH6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MSI2Q96DH6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MSI2Q96DH6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MSI2Q96DH6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MSI2Q96DH6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.49■□□□□ 0.55
MSI2Q96DH6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MSI2Q96DH6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.48■□□□□ 0.55
MSI2Q96DH6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
MSI2Q96DH6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.48■□□□□ 0.55
MSI2Q96DH6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MSI2Q96DH6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MSI2Q96DH6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MSI2Q96DH6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MSI2Q96DH6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.48■□□□□ 0.55
MSI2Q96DH6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
MSI2Q96DH6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MSI2Q96DH6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.48■□□□□ 0.55
MSI2Q96DH6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.48■□□□□ 0.55
MSI2Q96DH6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.48■□□□□ 0.55
MSI2Q96DH6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
MSI2Q96DH6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MSI2Q96DH6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
MSI2Q96DH6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
MSI2Q96DH6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
MSI2Q96DH6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.47■□□□□ 0.55
MSI2Q96DH6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.47■□□□□ 0.55
MSI2Q96DH6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
MSI2Q96DH6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
MSI2Q96DH6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
MSI2Q96DH6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.47■□□□□ 0.55
MSI2Q96DH6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.47■□□□□ 0.55
MSI2Q96DH6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.47■□□□□ 0.55
MSI2Q96DH6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI2Q96DH6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
MSI2Q96DH6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
MSI2Q96DH6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MSI2Q96DH6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI2Q96DH6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI2Q96DH6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI2Q96DH6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI2Q96DH6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI2Q96DH6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MSI2Q96DH6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI2Q96DH6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MSI2Q96DH6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.46■□□□□ 0.55
MSI2Q96DH6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MSI2Q96DH6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MSI2Q96DH6 AL499627.2-201ENST00000606283 725 ntBASIC18.46■□□□□ 0.55
MSI2Q96DH6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.46■□□□□ 0.55
MSI2Q96DH6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI2Q96DH6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.46■□□□□ 0.55
MSI2Q96DH6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MSI2Q96DH6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI2Q96DH6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.46■□□□□ 0.55
MSI2Q96DH6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
MSI2Q96DH6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.46■□□□□ 0.54
MSI2Q96DH6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MSI2Q96DH6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSI2Q96DH6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSI2Q96DH6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSI2Q96DH6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MSI2Q96DH6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
MSI2Q96DH6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.45■□□□□ 0.54
MSI2Q96DH6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MSI2Q96DH6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.45■□□□□ 0.54
MSI2Q96DH6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.45■□□□□ 0.54
MSI2Q96DH6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.45■□□□□ 0.54
MSI2Q96DH6 CCDC92B-201ENST00000575506 885 ntBASIC18.45■□□□□ 0.54
MSI2Q96DH6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.45■□□□□ 0.54
MSI2Q96DH6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.45■□□□□ 0.54
MSI2Q96DH6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms