Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 DUX4L6-201ENST00000626483 1275 ntBASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 DUX4L1-201ENST00000627662 1275 ntBASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 DUX4L8-201ENST00000629013 1275 ntBASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 DUX4L3-201ENST00000630187 1275 ntBASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 DUX4L7-201ENST00000630678 1275 ntBASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 DUX4L5-201ENST00000630834 1275 ntBASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 EP400NL-214ENST00000641289 2402 ntBASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 KRT18P14-201ENST00000534205 1250 ntBASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 TERF1P2-201ENST00000583350 1212 ntBASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3KBP1Q96B97 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3KBP1Q96B97 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3KBP1Q96B97 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.18■□□□□ 0.98
SH3KBP1Q96B97 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3KBP1Q96B97 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3KBP1Q96B97 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.18■□□□□ 0.98
SH3KBP1Q96B97 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3KBP1Q96B97 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.18■□□□□ 0.98
SH3KBP1Q96B97 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3KBP1Q96B97 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3KBP1Q96B97 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3KBP1Q96B97 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3KBP1Q96B97 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.18■□□□□ 0.98
SH3KBP1Q96B97 GUSBP5-202ENST00000510805 1989 ntBASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 KRT18P5-201ENST00000436075 1291 ntBASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 BX005040.4-201ENST00000637145 1518 ntBASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3KBP1Q96B97 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3KBP1Q96B97 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
SH3KBP1Q96B97 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3KBP1Q96B97 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3KBP1Q96B97 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SH3KBP1Q96B97 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3KBP1Q96B97 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3KBP1Q96B97 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.15■□□□□ 0.98
SH3KBP1Q96B97 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.15■□□□□ 0.98
SH3KBP1Q96B97 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3KBP1Q96B97 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SH3KBP1Q96B97 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.15■□□□□ 0.98
SH3KBP1Q96B97 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SH3KBP1Q96B97 ESRRAP2-201ENST00000418437 1549 ntBASIC21.14■□□□□ 0.98
SH3KBP1Q96B97 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SH3KBP1Q96B97 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3KBP1Q96B97 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.97
SH3KBP1Q96B97 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SH3KBP1Q96B97 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SH3KBP1Q96B97 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.14■□□□□ 0.97
SH3KBP1Q96B97 SMUG1P1-201ENST00000590640 811 ntBASIC21.14■□□□□ 0.97
SH3KBP1Q96B97 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SH3KBP1Q96B97 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3KBP1Q96B97 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SH3KBP1Q96B97 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3KBP1Q96B97 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3KBP1Q96B97 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.14■□□□□ 0.97
SH3KBP1Q96B97 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms