Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vmn1r28Q8R2C9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vmn1r28Q8R2C9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vmn1r28Q8R2C9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vmn1r28Q8R2C9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vmn1r28Q8R2C9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vmn1r28Q8R2C9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r28Q8R2C9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r28Q8R2C9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r28Q8R2C9 Iqck-206ENSMUST00000208658 2891 ntBASIC17.4■□□□□ 0.38
Vmn1r28Q8R2C9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r28Q8R2C9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r28Q8R2C9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r28Q8R2C9 Golph3-202ENSMUST00000226517 2359 ntBASIC17.4■□□□□ 0.38
Vmn1r28Q8R2C9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r28Q8R2C9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Vmn1r28Q8R2C9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r28Q8R2C9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r28Q8R2C9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r28Q8R2C9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Vmn1r28Q8R2C9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Vmn1r28Q8R2C9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Vmn1r28Q8R2C9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Vmn1r28Q8R2C9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r28Q8R2C9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r28Q8R2C9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r28Q8R2C9 Gm10849-201ENSMUST00000100397 618 ntBASIC17.38■□□□□ 0.37
Vmn1r28Q8R2C9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r28Q8R2C9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.38■□□□□ 0.37
Vmn1r28Q8R2C9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r28Q8R2C9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r28Q8R2C9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r28Q8R2C9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r28Q8R2C9 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.38■□□□□ 0.37
Vmn1r28Q8R2C9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r28Q8R2C9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Gm13146-201ENSMUST00000118508 780 ntBASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r28Q8R2C9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r28Q8R2C9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vmn1r28Q8R2C9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r28Q8R2C9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r28Q8R2C9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Vmn1r28Q8R2C9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.35■□□□□ 0.37
Vmn1r28Q8R2C9 Gm7514-201ENSMUST00000209475 934 ntBASIC17.35■□□□□ 0.37
Vmn1r28Q8R2C9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r28Q8R2C9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r28Q8R2C9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r28Q8R2C9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r28Q8R2C9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r28Q8R2C9 Gm27405-201ENSMUST00000184201 112 ntBASIC17.34■□□□□ 0.37
Vmn1r28Q8R2C9 Gm7291-201ENSMUST00000199147 382 ntBASIC17.34■□□□□ 0.37
Vmn1r28Q8R2C9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.34■□□□□ 0.37
Vmn1r28Q8R2C9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r28Q8R2C9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r28Q8R2C9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Vmn1r28Q8R2C9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms