Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 MIR638-201ENST00000385237 100 ntBASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 AC142381.2-201ENST00000566120 298 ntBASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 AC026471.6-201ENST00000622954 1905 ntBASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 FBXW4P1-201ENST00000426721 2239 ntBASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 AC105233.4-201ENST00000642045 216 ntBASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.54■□□□□ 0.56
COLCA1Q6ZS62 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.53■□□□□ 0.56
COLCA1Q6ZS62 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
COLCA1Q6ZS62 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.53■□□□□ 0.56
COLCA1Q6ZS62 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COLCA1Q6ZS62 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COLCA1Q6ZS62 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COLCA1Q6ZS62 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COLCA1Q6ZS62 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COLCA1Q6ZS62 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.53■□□□□ 0.56
COLCA1Q6ZS62 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.53■□□□□ 0.56
COLCA1Q6ZS62 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
COLCA1Q6ZS62 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COLCA1Q6ZS62 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.53■□□□□ 0.56
COLCA1Q6ZS62 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COLCA1Q6ZS62 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.52■□□□□ 0.56
COLCA1Q6ZS62 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COLCA1Q6ZS62 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COLCA1Q6ZS62 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.52■□□□□ 0.56
COLCA1Q6ZS62 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COLCA1Q6ZS62 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.52■□□□□ 0.56
COLCA1Q6ZS62 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COLCA1Q6ZS62 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.51■□□□□ 0.55
COLCA1Q6ZS62 AC244015.2-201ENST00000616358 1861 ntBASIC18.5■□□□□ 0.55
COLCA1Q6ZS62 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COLCA1Q6ZS62 AP006587.3-201ENST00000525742 1516 ntBASIC18.5■□□□□ 0.55
COLCA1Q6ZS62 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COLCA1Q6ZS62 AC012414.1-201ENST00000556676 535 ntBASIC18.5■□□□□ 0.55
COLCA1Q6ZS62 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
COLCA1Q6ZS62 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COLCA1Q6ZS62 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.5■□□□□ 0.55
COLCA1Q6ZS62 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
COLCA1Q6ZS62 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COLCA1Q6ZS62 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.5■□□□□ 0.55
COLCA1Q6ZS62 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 AC009237.3-201ENST00000393279 1427 ntBASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms