Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.77□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-1-dv6-1Q5R1D2 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.77□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.77□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Grk6-206ENSMUST00000224995 2971 ntBASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.71□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms