Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm3P62311 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm3P62311 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm3P62311 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm3P62311 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Lsm3P62311 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm3P62311 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lsm3P62311 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.34■□□□□ 0.37
Lsm3P62311 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.34■□□□□ 0.37
Lsm3P62311 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm3P62311 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm3P62311 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm3P62311 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.34■□□□□ 0.37
Lsm3P62311 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm3P62311 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm3P62311 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm3P62311 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm3P62311 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm3P62311 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm3P62311 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Lsm3P62311 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.33■□□□□ 0.37
Lsm3P62311 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lsm3P62311 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lsm3P62311 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Lsm3P62311 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm3P62311 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.33■□□□□ 0.36
Lsm3P62311 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm3P62311 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Lsm3P62311 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.33■□□□□ 0.36
Lsm3P62311 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm3P62311 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm3P62311 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm3P62311 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm3P62311 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm3P62311 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm3P62311 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm3P62311 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm3P62311 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm3P62311 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm3P62311 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Lsm3P62311 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm3P62311 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm3P62311 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm3P62311 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Lsm3P62311 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Lsm3P62311 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.31■□□□□ 0.36
Lsm3P62311 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm3P62311 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.3■□□□□ 0.36
Lsm3P62311 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lsm3P62311 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm3P62311 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm3P62311 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm3P62311 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm3P62311 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm3P62311 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.3■□□□□ 0.36
Lsm3P62311 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm3P62311 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm3P62311 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm3P62311 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lsm3P62311 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Lsm3P62311 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm3P62311 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Lsm3P62311 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.29■□□□□ 0.36
Lsm3P62311 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm3P62311 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm3P62311 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lsm3P62311 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm3P62311 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm3P62311 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm3P62311 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.29■□□□□ 0.36
Lsm3P62311 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm3P62311 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.29■□□□□ 0.36
Lsm3P62311 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm3P62311 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Lsm3P62311 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm3P62311 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.28■□□□□ 0.36
Lsm3P62311 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm3P62311 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm3P62311 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm3P62311 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lsm3P62311 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm3P62311 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm3P62311 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm3P62311 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm3P62311 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.27■□□□□ 0.36
Lsm3P62311 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms