Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 UTP25YIL091C 2166 nt2.68□□□□□ -1.98
CUP9P41817 YDR149CYDR149C 708 nt2.68□□□□□ -1.98
CUP9P41817 TOM20YGR082W 552 nt2.68□□□□□ -1.98
CUP9P41817 YHL005CYHL005C 393 nt2.68□□□□□ -1.98
CUP9P41817 CFD1YIL003W 882 nt2.68□□□□□ -1.98
CUP9P41817 RPL6AYML073C 531 nt2.68□□□□□ -1.98
CUP9P41817 YBL065WYBL065W 345 nt2.68□□□□□ -1.98
CUP9P41817 MGA1YGR249W 1371 nt2.68□□□□□ -1.98
CUP9P41817 EPO1YMR124W 2832 nt2.68□□□□□ -1.98
CUP9P41817 SER3YER081W 1410 nt2.68□□□□□ -1.98
CUP9P41817 SNQ2YDR011W 4506 nt2.67□□□□□ -1.98
CUP9P41817 IMH1YLR309C 2736 nt2.67□□□□□ -1.98
CUP9P41817 ERG26YGL001C 1050 nt2.67□□□□□ -1.98
CUP9P41817 RPN1YHR027C 2982 nt2.67□□□□□ -1.98
CUP9P41817 YHR137C-AYHR137C-A 651 nt2.67□□□□□ -1.98
CUP9P41817 PPX1YHR201C 1194 nt2.67□□□□□ -1.98
CUP9P41817 VAS1YGR094W 3315 nt2.67□□□□□ -1.98
CUP9P41817 CPA2YJR109C 3357 nt2.66□□□□□ -1.98
CUP9P41817 YCL068CYCL068C 783 nt2.66□□□□□ -1.98
CUP9P41817 YGL082WYGL082W 1146 nt2.66□□□□□ -1.98
CUP9P41817 YIL175WYIL175W 318 nt2.66□□□□□ -1.98
CUP9P41817 YJL222W-BYJL222W-B 138 nt2.66□□□□□ -1.98
CUP9P41817 GPI14YJR013W 1212 nt2.66□□□□□ -1.98
CUP9P41817 SMA2YML066C 1110 nt2.66□□□□□ -1.98
CUP9P41817 YOR238WYOR238W 912 nt2.66□□□□□ -1.98
CUP9P41817 RIB5YBR256C 717 nt2.66□□□□□ -1.98
CUP9P41817 YDL180WYDL180W 1644 nt2.66□□□□□ -1.98
CUP9P41817 HEH2YDR458C 1992 nt2.66□□□□□ -1.98
CUP9P41817 GIS4YML006C 2325 nt2.66□□□□□ -1.98
CUP9P41817 FUN30YAL019W 3396 nt2.66□□□□□ -1.98
CUP9P41817 PRR2YDL214C 2100 nt2.66□□□□□ -1.98
CUP9P41817 BCH1YMR237W 2175 nt2.66□□□□□ -1.98
CUP9P41817 RKM4YDR257C 1485 nt2.65□□□□□ -1.98
CUP9P41817 ORC1YML065W 2745 nt2.65□□□□□ -1.98
CUP9P41817 SKN7YHR206W 1869 nt2.65□□□□□ -1.98
CUP9P41817 HDA2YDR295C 2025 nt2.65□□□□□ -1.99
CUP9P41817 TLG1YDR468C 675 nt2.65□□□□□ -1.99
CUP9P41817 YEL032C-AYEL032C-A 162 nt2.65□□□□□ -1.99
CUP9P41817 YFL051CYFL051C 483 nt2.65□□□□□ -1.99
CUP9P41817 ERV29YGR284C 933 nt2.65□□□□□ -1.99
CUP9P41817 PRE8YML092C 753 nt2.65□□□□□ -1.99
CUP9P41817 RRG9YNL213C 645 nt2.65□□□□□ -1.99
CUP9P41817 ATG3YNR007C 933 nt2.65□□□□□ -1.99
CUP9P41817 YPP1YGR198W 2454 nt2.65□□□□□ -1.99
CUP9P41817 YDR098C-AYDR098C-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YDR210C-CYDR210C-C 1323 nt2.65□□□□□ -1.99
CUP9P41817 YDR261C-CYDR261C-C 1323 nt2.65□□□□□ -1.99
CUP9P41817 YDR316W-AYDR316W-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YDR365W-AYDR365W-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YER137C-AYER137C-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YER159C-AYER159C-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YGR027W-AYGR027W-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YGR038C-AYGR038C-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YGR161C-CYGR161C-C 1323 nt2.65□□□□□ -1.99
CUP9P41817 YJR026WYJR026W 1323 nt2.65□□□□□ -1.99
CUP9P41817 YJR028WYJR028W 1323 nt2.65□□□□□ -1.99
CUP9P41817 YAR010CYAR010C 1323 nt2.65□□□□□ -1.99
CUP9P41817 YLR157C-AYLR157C-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YLR227W-AYLR227W-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YLR256W-AYLR256W-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YML040WYML040W 1323 nt2.65□□□□□ -1.99
CUP9P41817 YML045W-AYML045W-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YMR051CYMR051C 1323 nt2.65□□□□□ -1.99
CUP9P41817 YNL054W-AYNL054W-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YOL103W-AYOL103W-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YPL257W-AYPL257W-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YPR137C-AYPR137C-A 1323 nt2.65□□□□□ -1.99
CUP9P41817 YPR158C-CYPR158C-C 1323 nt2.65□□□□□ -1.99
CUP9P41817 PRS5YOL061W 1491 nt2.65□□□□□ -1.99
CUP9P41817 CHS2YBR038W 2892 nt2.64□□□□□ -1.99
CUP9P41817 PHO92YDR374C 921 nt2.64□□□□□ -1.99
CUP9P41817 YGR273CYGR273C 525 nt2.64□□□□□ -1.99
CUP9P41817 YPT35YHR105W 645 nt2.64□□□□□ -1.99
CUP9P41817 LSM1YJL124C 519 nt2.64□□□□□ -1.99
CUP9P41817 YKL091CYKL091C 933 nt2.64□□□□□ -1.99
CUP9P41817 CPR8YNR028W 927 nt2.64□□□□□ -1.99
CUP9P41817 IZH2YOL002C 954 nt2.64□□□□□ -1.99
CUP9P41817 MSN1YOL116W 1149 nt2.64□□□□□ -1.99
CUP9P41817 MRPL37YBR268W 318 nt2.64□□□□□ -1.99
CUP9P41817 YGR117CYGR117C 1431 nt2.64□□□□□ -1.99
CUP9P41817 CSR2YPR030W 3366 nt2.64□□□□□ -1.99
CUP9P41817 ABD1YBR236C 1311 nt2.64□□□□□ -1.99
CUP9P41817 SPO71YDR104C 3738 nt2.64□□□□□ -1.99
CUP9P41817 PUS9YDL036C 1389 nt2.63□□□□□ -1.99
CUP9P41817 YBR238CYBR238C 2196 nt2.63□□□□□ -1.99
CUP9P41817 SEC27YGL137W 2670 nt2.63□□□□□ -1.99
CUP9P41817 RCY1YJL204C 2523 nt2.63□□□□□ -1.99
CUP9P41817 YDR249CYDR249C 1122 nt2.63□□□□□ -1.99
CUP9P41817 SPT15YER148W 723 nt2.63□□□□□ -1.99
CUP9P41817 LST7YGR057C 729 nt2.63□□□□□ -1.99
CUP9P41817 YLR402WYLR402W 192 nt2.63□□□□□ -1.99
CUP9P41817 UNG1YML021C 1080 nt2.63□□□□□ -1.99
CUP9P41817 YNL013CYNL013C 378 nt2.63□□□□□ -1.99
CUP9P41817 SAS5YOR213C 747 nt2.63□□□□□ -1.99
CUP9P41817 PBP2YBR233W 1242 nt2.63□□□□□ -1.99
CUP9P41817 MDM1YML104C 3384 nt2.63□□□□□ -1.99
CUP9P41817 ECM21YBL101C 3354 nt2.63□□□□□ -1.99
CUP9P41817 MIC60YKR016W 1623 nt2.63□□□□□ -1.99
CUP9P41817 KTR6YPL053C 1341 nt2.63□□□□□ -1.99
CUP9P41817 FRE8YLR047C 2061 nt2.62□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 65.2 ms