Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.68■■□□□ 1.22
MMP8P22894 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MMP8P22894 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
MMP8P22894 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
MMP8P22894 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.67■■□□□ 1.22
MMP8P22894 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP8P22894 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.67■■□□□ 1.22
MMP8P22894 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
MMP8P22894 CLDN5-201ENST00000403084 2357 ntBASIC22.67■■□□□ 1.22
MMP8P22894 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
MMP8P22894 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP8P22894 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
MMP8P22894 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.67■■□□□ 1.22
MMP8P22894 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
MMP8P22894 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP8P22894 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP8P22894 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP8P22894 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MMP8P22894 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MMP8P22894 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MMP8P22894 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.66■■□□□ 1.22
MMP8P22894 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MMP8P22894 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.66■■□□□ 1.22
MMP8P22894 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
MMP8P22894 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MMP8P22894 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.66■■□□□ 1.22
MMP8P22894 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MMP8P22894 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MMP8P22894 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.65■■□□□ 1.22
MMP8P22894 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MMP8P22894 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MMP8P22894 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
MMP8P22894 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MMP8P22894 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MMP8P22894 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.65■■□□□ 1.22
MMP8P22894 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MMP8P22894 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MMP8P22894 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.64■■□□□ 1.22
MMP8P22894 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.64■■□□□ 1.22
MMP8P22894 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
MMP8P22894 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MMP8P22894 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
MMP8P22894 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
MMP8P22894 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MMP8P22894 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
MMP8P22894 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.64■■□□□ 1.21
MMP8P22894 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.64■■□□□ 1.21
MMP8P22894 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.64■■□□□ 1.21
MMP8P22894 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
MMP8P22894 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
MMP8P22894 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MMP8P22894 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
MMP8P22894 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP8P22894 AC244015.2-201ENST00000616358 1861 ntBASIC22.63■■□□□ 1.21
MMP8P22894 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP8P22894 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.63■■□□□ 1.21
MMP8P22894 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.63■■□□□ 1.21
MMP8P22894 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP8P22894 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.63■■□□□ 1.21
MMP8P22894 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP8P22894 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP8P22894 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP8P22894 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.63■■□□□ 1.21
MMP8P22894 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP8P22894 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
MMP8P22894 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP8P22894 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.62■■□□□ 1.21
MMP8P22894 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.62■■□□□ 1.21
MMP8P22894 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP8P22894 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.62■■□□□ 1.21
MMP8P22894 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.62■■□□□ 1.21
MMP8P22894 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.62■■□□□ 1.21
MMP8P22894 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.62■■□□□ 1.21
MMP8P22894 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP8P22894 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
MMP8P22894 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.61■■□□□ 1.21
MMP8P22894 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MMP8P22894 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MMP8P22894 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MMP8P22894 MIR572-201ENST00000384983 95 ntBASIC22.61■■□□□ 1.21
MMP8P22894 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
MMP8P22894 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.61■■□□□ 1.21
MMP8P22894 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.61■■□□□ 1.21
MMP8P22894 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
MMP8P22894 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.61■■□□□ 1.21
MMP8P22894 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
MMP8P22894 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.6■■□□□ 1.21
MMP8P22894 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.6■■□□□ 1.21
MMP8P22894 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.6■■□□□ 1.21
MMP8P22894 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
MMP8P22894 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
MMP8P22894 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.6■■□□□ 1.21
MMP8P22894 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.6■■□□□ 1.21
MMP8P22894 AC105233.4-201ENST00000642045 216 ntBASIC22.6■■□□□ 1.21
MMP8P22894 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
MMP8P22894 AC007375.3-201ENST00000600936 2314 ntBASIC22.6■■□□□ 1.21
MMP8P22894 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
MMP8P22894 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MMP8P22894 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MMP8P22894 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms