Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GPC4O75487 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GPC4O75487 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GPC4O75487 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.44■■□□□ 1.02
GPC4O75487 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
GPC4O75487 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
GPC4O75487 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.44■■□□□ 1.02
GPC4O75487 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.44■■□□□ 1.02
GPC4O75487 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.44■■□□□ 1.02
GPC4O75487 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GPC4O75487 AP005435.1-201ENST00000529293 1178 ntBASIC21.44■■□□□ 1.02
GPC4O75487 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GPC4O75487 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.44■■□□□ 1.02
GPC4O75487 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GPC4O75487 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GPC4O75487 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.44■■□□□ 1.02
GPC4O75487 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.44■■□□□ 1.02
GPC4O75487 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GPC4O75487 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GPC4O75487 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
GPC4O75487 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
GPC4O75487 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GPC4O75487 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GPC4O75487 AC080038.3-201ENST00000623346 1952 ntBASIC21.43■■□□□ 1.02
GPC4O75487 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GPC4O75487 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.43■■□□□ 1.02
GPC4O75487 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.43■■□□□ 1.02
GPC4O75487 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.43■■□□□ 1.02
GPC4O75487 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GPC4O75487 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GPC4O75487 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
GPC4O75487 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.43■■□□□ 1.02
GPC4O75487 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GPC4O75487 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
GPC4O75487 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
GPC4O75487 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GPC4O75487 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GPC4O75487 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.42■■□□□ 1.02
GPC4O75487 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
GPC4O75487 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GPC4O75487 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GPC4O75487 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GPC4O75487 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.42■■□□□ 1.02
GPC4O75487 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.42■■□□□ 1.02
GPC4O75487 SUDS3P1-201ENST00000505831 966 ntBASIC21.42■■□□□ 1.02
GPC4O75487 AP001330.3-201ENST00000520123 633 ntBASIC21.42■■□□□ 1.02
GPC4O75487 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.42■■□□□ 1.02
GPC4O75487 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
GPC4O75487 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GPC4O75487 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GPC4O75487 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
GPC4O75487 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GPC4O75487 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GPC4O75487 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GPC4O75487 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GPC4O75487 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GPC4O75487 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GPC4O75487 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GPC4O75487 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.41■■□□□ 1.02
GPC4O75487 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.41■■□□□ 1.02
GPC4O75487 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
GPC4O75487 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GPC4O75487 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GPC4O75487 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GPC4O75487 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GPC4O75487 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
GPC4O75487 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
GPC4O75487 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GPC4O75487 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GPC4O75487 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GPC4O75487 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.4■■□□□ 1.02
GPC4O75487 MIR939-201ENST00000401314 82 ntBASIC21.4■■□□□ 1.02
GPC4O75487 AL136967.2-201ENST00000623968 743 ntBASIC21.4■■□□□ 1.02
GPC4O75487 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GPC4O75487 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GPC4O75487 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
GPC4O75487 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GPC4O75487 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
GPC4O75487 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
GPC4O75487 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
GPC4O75487 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
GPC4O75487 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.39■■□□□ 1.01
GPC4O75487 AC027682.1-201ENST00000562846 899 ntBASIC21.39■■□□□ 1.01
GPC4O75487 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GPC4O75487 AC008764.7-201ENST00000593779 1081 ntBASIC21.39■■□□□ 1.01
GPC4O75487 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GPC4O75487 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GPC4O75487 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
GPC4O75487 FBXW4P1-201ENST00000426721 2239 ntBASIC21.39■■□□□ 1.01
GPC4O75487 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
GPC4O75487 MIR638-201ENST00000385237 100 ntBASIC21.38■■□□□ 1.01
GPC4O75487 AC099791.1-201ENST00000416440 715 ntBASIC21.38■■□□□ 1.01
GPC4O75487 AC010141.3-201ENST00000456659 717 ntBASIC21.38■■□□□ 1.01
GPC4O75487 AF213884.3-201ENST00000563833 479 ntBASIC21.38■■□□□ 1.01
GPC4O75487 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.38■■□□□ 1.01
GPC4O75487 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.38■■□□□ 1.01
GPC4O75487 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.38■■□□□ 1.01
GPC4O75487 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GPC4O75487 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
GPC4O75487 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms