Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.74■□□□□ 0.91
PRAMEF4O60810 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.74■□□□□ 0.91
PRAMEF4O60810 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
PRAMEF4O60810 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF4O60810 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF4O60810 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF4O60810 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
PRAMEF4O60810 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF4O60810 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.73■□□□□ 0.91
PRAMEF4O60810 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.73■□□□□ 0.91
PRAMEF4O60810 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF4O60810 AC027682.1-201ENST00000562846 899 ntBASIC20.73■□□□□ 0.91
PRAMEF4O60810 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.73■□□□□ 0.91
PRAMEF4O60810 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF4O60810 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.73■□□□□ 0.91
PRAMEF4O60810 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF4O60810 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.73■□□□□ 0.91
PRAMEF4O60810 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF4O60810 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF4O60810 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF4O60810 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF4O60810 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PRAMEF4O60810 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF4O60810 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PRAMEF4O60810 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF4O60810 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PRAMEF4O60810 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF4O60810 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF4O60810 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
PRAMEF4O60810 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.72■□□□□ 0.91
PRAMEF4O60810 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PRAMEF4O60810 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF4O60810 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.71■□□□□ 0.91
PRAMEF4O60810 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
PRAMEF4O60810 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF4O60810 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.71■□□□□ 0.91
PRAMEF4O60810 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PRAMEF4O60810 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEF4O60810 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEF4O60810 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.71■□□□□ 0.91
PRAMEF4O60810 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF4O60810 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF4O60810 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF4O60810 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.71■□□□□ 0.91
PRAMEF4O60810 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF4O60810 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.71■□□□□ 0.91
PRAMEF4O60810 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF4O60810 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PRAMEF4O60810 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF4O60810 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF4O60810 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF4O60810 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PRAMEF4O60810 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.7■□□□□ 0.9
PRAMEF4O60810 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.7■□□□□ 0.9
PRAMEF4O60810 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF4O60810 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
PRAMEF4O60810 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PRAMEF4O60810 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF4O60810 TSPY26P-201ENST00000476365 1326 ntBASIC20.7■□□□□ 0.9
PRAMEF4O60810 AP004607.7-201ENST00000527152 1677 ntBASIC20.7■□□□□ 0.9
PRAMEF4O60810 RASA4CP-201ENST00000424092 1398 ntBASIC20.7■□□□□ 0.9
PRAMEF4O60810 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF4O60810 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF4O60810 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF4O60810 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.69■□□□□ 0.9
PRAMEF4O60810 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF4O60810 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PRAMEF4O60810 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF4O60810 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF4O60810 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF4O60810 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.69■□□□□ 0.9
PRAMEF4O60810 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PRAMEF4O60810 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF4O60810 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF4O60810 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.69■□□□□ 0.9
PRAMEF4O60810 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF4O60810 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF4O60810 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF4O60810 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.68■□□□□ 0.9
PRAMEF4O60810 AC091305.1-201ENST00000479476 895 ntBASIC20.68■□□□□ 0.9
PRAMEF4O60810 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.68■□□□□ 0.9
PRAMEF4O60810 AC026310.3-201ENST00000625186 2373 ntBASIC20.68■□□□□ 0.9
PRAMEF4O60810 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PRAMEF4O60810 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF4O60810 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF4O60810 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF4O60810 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF4O60810 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.68■□□□□ 0.9
PRAMEF4O60810 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF4O60810 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF4O60810 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEF4O60810 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PRAMEF4O60810 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF4O60810 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.67■□□□□ 0.9
PRAMEF4O60810 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.67■□□□□ 0.9
PRAMEF4O60810 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.67■□□□□ 0.9
PRAMEF4O60810 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEF4O60810 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.67■□□□□ 0.9
PRAMEF4O60810 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PRAMEF4O60810 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms