Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ChkaO54804 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ChkaO54804 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ChkaO54804 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ChkaO54804 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ChkaO54804 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ChkaO54804 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ChkaO54804 Gm27454-201ENSMUST00000185090 204 ntBASIC19.15■□□□□ 0.66
ChkaO54804 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.15■□□□□ 0.66
ChkaO54804 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ChkaO54804 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ChkaO54804 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ChkaO54804 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ChkaO54804 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ChkaO54804 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ChkaO54804 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ChkaO54804 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ChkaO54804 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.14■□□□□ 0.65
ChkaO54804 Gm43173-201ENSMUST00000202246 593 ntBASIC19.14■□□□□ 0.65
ChkaO54804 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ChkaO54804 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ChkaO54804 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ChkaO54804 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ChkaO54804 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ChkaO54804 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ChkaO54804 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ChkaO54804 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ChkaO54804 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ChkaO54804 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ChkaO54804 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ChkaO54804 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ChkaO54804 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ChkaO54804 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ChkaO54804 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ChkaO54804 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ChkaO54804 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ChkaO54804 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ChkaO54804 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ChkaO54804 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.12■□□□□ 0.65
ChkaO54804 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ChkaO54804 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.12■□□□□ 0.65
ChkaO54804 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.12■□□□□ 0.65
ChkaO54804 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ChkaO54804 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ChkaO54804 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ChkaO54804 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ChkaO54804 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ChkaO54804 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ChkaO54804 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ChkaO54804 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ChkaO54804 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ChkaO54804 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ChkaO54804 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ChkaO54804 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ChkaO54804 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ChkaO54804 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ChkaO54804 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ChkaO54804 Gm11421-201ENSMUST00000122124 294 ntBASIC19.11■□□□□ 0.65
ChkaO54804 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ChkaO54804 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ChkaO54804 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ChkaO54804 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ChkaO54804 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ChkaO54804 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ChkaO54804 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ChkaO54804 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ChkaO54804 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ChkaO54804 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ChkaO54804 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ChkaO54804 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ChkaO54804 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
ChkaO54804 Gm8493-201ENSMUST00000196881 489 ntBASIC19.1■□□□□ 0.65
ChkaO54804 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.1■□□□□ 0.65
ChkaO54804 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ChkaO54804 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ChkaO54804 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ChkaO54804 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ChkaO54804 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ChkaO54804 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ChkaO54804 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ChkaO54804 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ChkaO54804 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.09■□□□□ 0.65
ChkaO54804 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ChkaO54804 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ChkaO54804 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ChkaO54804 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ChkaO54804 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
ChkaO54804 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ChkaO54804 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ChkaO54804 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ChkaO54804 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ChkaO54804 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ChkaO54804 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ChkaO54804 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ChkaO54804 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ChkaO54804 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ChkaO54804 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ChkaO54804 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ChkaO54804 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.08■□□□□ 0.65
ChkaO54804 Gm45417-201ENSMUST00000209533 758 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms