Protein–RNA interactions for Protein: O35599

Opn1mw, Medium-wave-sensitive opsin 1, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Opn1mwO35599 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Opn1mwO35599 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Opn1mwO35599 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Opn1mwO35599 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Opn1mwO35599 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Opn1mwO35599 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Opn1mwO35599 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Opn1mwO35599 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.86■□□□□ 0.61
Opn1mwO35599 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Opn1mwO35599 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Opn1mwO35599 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.86■□□□□ 0.61
Opn1mwO35599 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Opn1mwO35599 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.86■□□□□ 0.61
Opn1mwO35599 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Opn1mwO35599 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Opn1mwO35599 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Opn1mwO35599 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Opn1mwO35599 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Opn1mwO35599 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Opn1mwO35599 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Opn1mwO35599 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Opn1mwO35599 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Opn1mwO35599 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.85■□□□□ 0.61
Opn1mwO35599 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Opn1mwO35599 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Opn1mwO35599 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Opn1mwO35599 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Opn1mwO35599 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Opn1mwO35599 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Opn1mwO35599 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Opn1mwO35599 Gm6576-201ENSMUST00000169678 883 ntBASIC18.84■□□□□ 0.61
Opn1mwO35599 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.84■□□□□ 0.61
Opn1mwO35599 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Opn1mwO35599 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Opn1mwO35599 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Opn1mwO35599 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Opn1mwO35599 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Opn1mwO35599 Dio3-201ENSMUST00000097228 1449 ntBASIC18.83■□□□□ 0.61
Opn1mwO35599 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Opn1mwO35599 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Opn1mwO35599 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Opn1mwO35599 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Opn1mwO35599 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Opn1mwO35599 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Opn1mwO35599 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Opn1mwO35599 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.83■□□□□ 0.6
Opn1mwO35599 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.83■□□□□ 0.6
Opn1mwO35599 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.83■□□□□ 0.6
Opn1mwO35599 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.83■□□□□ 0.6
Opn1mwO35599 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Opn1mwO35599 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.83■□□□□ 0.6
Opn1mwO35599 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Opn1mwO35599 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Opn1mwO35599 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Opn1mwO35599 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Opn1mwO35599 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.82■□□□□ 0.6
Opn1mwO35599 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Opn1mwO35599 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Opn1mwO35599 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Opn1mwO35599 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Opn1mwO35599 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Opn1mwO35599 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Opn1mwO35599 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Opn1mwO35599 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Opn1mwO35599 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Opn1mwO35599 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Opn1mwO35599 Gm7977-201ENSMUST00000193787 748 ntBASIC18.81■□□□□ 0.6
Opn1mwO35599 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Opn1mwO35599 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Opn1mwO35599 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Opn1mwO35599 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Opn1mwO35599 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.81■□□□□ 0.6
Opn1mwO35599 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Opn1mwO35599 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.8■□□□□ 0.6
Opn1mwO35599 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.8■□□□□ 0.6
Opn1mwO35599 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.8■□□□□ 0.6
Opn1mwO35599 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Opn1mwO35599 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Opn1mwO35599 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Opn1mwO35599 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Opn1mwO35599 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.79■□□□□ 0.6
Opn1mwO35599 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Opn1mwO35599 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Opn1mwO35599 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Opn1mwO35599 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Opn1mwO35599 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Opn1mwO35599 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.79■□□□□ 0.6
Opn1mwO35599 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Opn1mwO35599 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Opn1mwO35599 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.79■□□□□ 0.6
Opn1mwO35599 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Opn1mwO35599 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Opn1mwO35599 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Opn1mwO35599 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Opn1mwO35599 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Opn1mwO35599 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.78■□□□□ 0.6
Opn1mwO35599 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Opn1mwO35599 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Opn1mwO35599 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Opn1mwO35599 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms