Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.23■□□□□ 0.83
CLIC1O00299 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC1O00299 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC1O00299 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC1O00299 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.23■□□□□ 0.83
CLIC1O00299 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC1O00299 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CLIC1O00299 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLIC1O00299 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.22■□□□□ 0.83
CLIC1O00299 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.22■□□□□ 0.83
CLIC1O00299 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLIC1O00299 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLIC1O00299 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLIC1O00299 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLIC1O00299 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLIC1O00299 OR2I1P-207ENST00000453522 948 ntBASIC20.22■□□□□ 0.83
CLIC1O00299 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.22■□□□□ 0.83
CLIC1O00299 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CLIC1O00299 FEM1AP4-201ENST00000443167 1987 ntBASIC20.22■□□□□ 0.83
CLIC1O00299 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLIC1O00299 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLIC1O00299 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.22■□□□□ 0.83
CLIC1O00299 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLIC1O00299 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.21■□□□□ 0.83
CLIC1O00299 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.21■□□□□ 0.83
CLIC1O00299 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLIC1O00299 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CLIC1O00299 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLIC1O00299 AC104564.3-201ENST00000582367 638 ntBASIC20.21■□□□□ 0.83
CLIC1O00299 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.21■□□□□ 0.83
CLIC1O00299 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLIC1O00299 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CLIC1O00299 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLIC1O00299 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLIC1O00299 AF106564.1-201ENST00000607058 2553 ntBASIC20.21■□□□□ 0.83
CLIC1O00299 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.21■□□□□ 0.83
CLIC1O00299 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLIC1O00299 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.21■□□□□ 0.83
CLIC1O00299 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.83
CLIC1O00299 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLIC1O00299 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CLIC1O00299 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CLIC1O00299 AC087239.1-201ENST00000622671 572 ntBASIC20.2■□□□□ 0.82
CLIC1O00299 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.2■□□□□ 0.82
CLIC1O00299 AL035685.1-201ENST00000636663 812 ntBASIC20.2■□□□□ 0.82
CLIC1O00299 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CLIC1O00299 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.2■□□□□ 0.82
CLIC1O00299 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
CLIC1O00299 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.19■□□□□ 0.82
CLIC1O00299 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
CLIC1O00299 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC1O00299 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CLIC1O00299 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC1O00299 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.18■□□□□ 0.82
CLIC1O00299 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.18■□□□□ 0.82
CLIC1O00299 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC1O00299 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.18■□□□□ 0.82
CLIC1O00299 GUSBP5-201ENST00000418136 578 ntBASIC20.18■□□□□ 0.82
CLIC1O00299 SRD5A1P1-201ENST00000442297 786 ntBASIC20.18■□□□□ 0.82
CLIC1O00299 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.18■□□□□ 0.82
CLIC1O00299 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.18■□□□□ 0.82
CLIC1O00299 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.18■□□□□ 0.82
CLIC1O00299 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLIC1O00299 AC092171.4-201ENST00000609130 632 ntBASIC20.18■□□□□ 0.82
CLIC1O00299 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC1O00299 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC1O00299 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.18■□□□□ 0.82
CLIC1O00299 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC1O00299 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC1O00299 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC1O00299 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLIC1O00299 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC1O00299 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CLIC1O00299 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC1O00299 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLIC1O00299 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC1O00299 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC1O00299 AC010141.3-201ENST00000456659 717 ntBASIC20.17■□□□□ 0.82
CLIC1O00299 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC1O00299 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC1O00299 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC1O00299 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.17■□□□□ 0.82
CLIC1O00299 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC1O00299 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC1O00299 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.17■□□□□ 0.82
CLIC1O00299 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
CLIC1O00299 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms