Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm4950D3YUM8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm4950D3YUM8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm4950D3YUM8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm4950D3YUM8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm4950D3YUM8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm4950D3YUM8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Gm4950D3YUM8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Gm12821-201ENSMUST00000120022 600 ntBASIC16.2■□□□□ 0.18
Gm4950D3YUM8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Mir7075-201ENSMUST00000184187 82 ntBASIC16.2■□□□□ 0.18
Gm4950D3YUM8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm4950D3YUM8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm4950D3YUM8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Gm4950D3YUM8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.17■□□□□ 0.18
Gm4950D3YUM8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm4950D3YUM8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm4950D3YUM8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm4950D3YUM8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm4950D3YUM8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.16■□□□□ 0.18
Gm4950D3YUM8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.16■□□□□ 0.18
Gm4950D3YUM8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm4950D3YUM8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm4950D3YUM8 Gm27454-201ENSMUST00000185090 204 ntBASIC16.16■□□□□ 0.18
Gm4950D3YUM8 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.16■□□□□ 0.18
Gm4950D3YUM8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.16■□□□□ 0.18
Gm4950D3YUM8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gm4950D3YUM8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms