Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 AC244015.2-201ENST00000616358 1861 ntBASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
TCRBV5S1A1TA0A578 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV5S1A1TA0A578 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
TCRBV5S1A1TA0A578 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV5S1A1TA0A578 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TCRBV5S1A1TA0A578 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV5S1A1TA0A578 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV5S1A1TA0A578 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCRBV5S1A1TA0A578 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.55■■□□□ 1.2
TCRBV5S1A1TA0A578 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TCRBV5S1A1TA0A578 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.54■■□□□ 1.2
TCRBV5S1A1TA0A578 AC091305.1-201ENST00000479476 895 ntBASIC22.54■■□□□ 1.2
TCRBV5S1A1TA0A578 AL034346.1-201ENST00000568244 1277 ntBASIC22.54■■□□□ 1.2
TCRBV5S1A1TA0A578 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
TCRBV5S1A1TA0A578 TSPY26P-201ENST00000476365 1326 ntBASIC22.54■■□□□ 1.2
TCRBV5S1A1TA0A578 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TCRBV5S1A1TA0A578 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TCRBV5S1A1TA0A578 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TCRBV5S1A1TA0A578 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TCRBV5S1A1TA0A578 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TCRBV5S1A1TA0A578 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TCRBV5S1A1TA0A578 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TCRBV5S1A1TA0A578 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TCRBV5S1A1TA0A578 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.53■■□□□ 1.2
TCRBV5S1A1TA0A578 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.53■■□□□ 1.2
TCRBV5S1A1TA0A578 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.53■■□□□ 1.2
TCRBV5S1A1TA0A578 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TCRBV5S1A1TA0A578 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.53■■□□□ 1.2
TCRBV5S1A1TA0A578 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TCRBV5S1A1TA0A578 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.52■■□□□ 1.2
TCRBV5S1A1TA0A578 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TCRBV5S1A1TA0A578 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TCRBV5S1A1TA0A578 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.52■■□□□ 1.2
TCRBV5S1A1TA0A578 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
TCRBV5S1A1TA0A578 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TCRBV5S1A1TA0A578 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TCRBV5S1A1TA0A578 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.52■■□□□ 1.2
TCRBV5S1A1TA0A578 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV5S1A1TA0A578 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.51■■□□□ 1.19
TCRBV5S1A1TA0A578 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.51■■□□□ 1.19
TCRBV5S1A1TA0A578 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV5S1A1TA0A578 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV5S1A1TA0A578 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.51■■□□□ 1.19
TCRBV5S1A1TA0A578 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
TCRBV5S1A1TA0A578 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV5S1A1TA0A578 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.51■■□□□ 1.19
TCRBV5S1A1TA0A578 AC026310.3-201ENST00000625186 2373 ntBASIC22.51■■□□□ 1.19
TCRBV5S1A1TA0A578 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV5S1A1TA0A578 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV5S1A1TA0A578 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV5S1A1TA0A578 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.5■■□□□ 1.19
TCRBV5S1A1TA0A578 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.5■■□□□ 1.19
TCRBV5S1A1TA0A578 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCRBV5S1A1TA0A578 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCRBV5S1A1TA0A578 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.5■■□□□ 1.19
TCRBV5S1A1TA0A578 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.5■■□□□ 1.19
TCRBV5S1A1TA0A578 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.5■■□□□ 1.19
TCRBV5S1A1TA0A578 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TCRBV5S1A1TA0A578 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCRBV5S1A1TA0A578 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCRBV5S1A1TA0A578 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCRBV5S1A1TA0A578 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 AC003102.1-202ENST00000563394 1796 ntBASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 AP006587.3-201ENST00000525742 1516 ntBASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 MIR572-201ENST00000384983 95 ntBASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.49■■□□□ 1.19
TCRBV5S1A1TA0A578 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
TCRBV5S1A1TA0A578 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.48■■□□□ 1.19
TCRBV5S1A1TA0A578 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TCRBV5S1A1TA0A578 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.48■■□□□ 1.19
TCRBV5S1A1TA0A578 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TCRBV5S1A1TA0A578 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.48■■□□□ 1.19
TCRBV5S1A1TA0A578 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
TCRBV5S1A1TA0A578 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TCRBV5S1A1TA0A578 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.47■■□□□ 1.19
TCRBV5S1A1TA0A578 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TCRBV5S1A1TA0A578 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.47■■□□□ 1.19
TCRBV5S1A1TA0A578 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TCRBV5S1A1TA0A578 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.47■■□□□ 1.19
TCRBV5S1A1TA0A578 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
TCRBV5S1A1TA0A578 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.47■■□□□ 1.19
TCRBV5S1A1TA0A578 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms