Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Gm40848-201ENSMUST00000221998 324 ntBASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav9n-2A0A0G2JDP3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.75□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Gm26833-201ENSMUST00000180899 440 ntBASIC13.75□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9n-2A0A0G2JDP3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9n-2A0A0G2JDP3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9n-2A0A0G2JDP3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.73□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Trav9n-2A0A0G2JDP3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms