Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-3A0A0B4J1K1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4-3A0A0B4J1K1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4-3A0A0B4J1K1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4-3A0A0B4J1K1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4-3A0A0B4J1K1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4-3A0A0B4J1K1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-3A0A0B4J1K1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-3A0A0B4J1K1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-3A0A0B4J1K1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-3A0A0B4J1K1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav4-3A0A0B4J1K1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-3A0A0B4J1K1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-3A0A0B4J1K1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-3A0A0B4J1K1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Trav4-3A0A0B4J1K1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-3A0A0B4J1K1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav4-3A0A0B4J1K1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav4-3A0A0B4J1K1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gm14523-201ENSMUST00000117260 558 ntBASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-3A0A0B4J1K1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms