Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.46■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Serp2-204ENSMUST00000228055 705 ntBASIC15.46■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15-2-dv6-2A0A075B650 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms