Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Gm27502-201ENSMUST00000183495 199 ntBASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8-1A0A075B641 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Gm14523-201ENSMUST00000117260 558 ntBASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8-1A0A075B641 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav8-1A0A075B641 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav8-1A0A075B641 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav8-1A0A075B641 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Gm7332-201ENSMUST00000118351 454 ntBASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8-1A0A075B641 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms