Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-55A0A075B5W6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-55A0A075B5W6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-55A0A075B5W6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-55A0A075B5W6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-55A0A075B5W6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Ighv1-55A0A075B5W6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-55A0A075B5W6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-55A0A075B5W6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ighv1-55A0A075B5W6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ighv1-55A0A075B5W6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Ighv1-55A0A075B5W6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ighv1-55A0A075B5W6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ighv1-55A0A075B5W6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ighv1-55A0A075B5W6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Ighv1-55A0A075B5W6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Gm9988-201ENSMUST00000069786 435 ntBASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-55A0A075B5W6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Gm38205-201ENSMUST00000192243 258 ntBASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Ighv1-55A0A075B5W6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-55A0A075B5W6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-55A0A075B5W6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-55A0A075B5W6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-55A0A075B5W6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-55A0A075B5W6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-55A0A075B5W6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-55A0A075B5W6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-55A0A075B5W6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ighv1-55A0A075B5W6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-55A0A075B5W6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.92□□□□□ -0.02
Ighv1-55A0A075B5W6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.92□□□□□ -0.02
Ighv1-55A0A075B5W6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-55A0A075B5W6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms