Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 MIR572-201ENST00000384983 95 ntBASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 CCDC92B-201ENST00000575506 885 ntBASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 AC010525.1-201ENST00000585559 441 ntBASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB1Q9Y5F3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHB1Q9Y5F3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.54■■□□□ 1.04
PCDHB1Q9Y5F3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHB1Q9Y5F3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB1Q9Y5F3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PCDHB1Q9Y5F3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHB1Q9Y5F3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHB1Q9Y5F3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB1Q9Y5F3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHB1Q9Y5F3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB1Q9Y5F3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 ID1-201ENST00000376105 1233 ntBASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB1Q9Y5F3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 AC010141.3-201ENST00000456659 717 ntBASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 AC079089.2-201ENST00000531211 1277 ntBASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB1Q9Y5F3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDHB1Q9Y5F3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 AP005435.1-201ENST00000529293 1178 ntBASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 NTF6G-201ENST00000591094 616 ntBASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 AL354811.1-201ENST00000610286 706 ntBASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB1Q9Y5F3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB1Q9Y5F3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PCDHB1Q9Y5F3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.5■■□□□ 1.03
PCDHB1Q9Y5F3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHB1Q9Y5F3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHB1Q9Y5F3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB1Q9Y5F3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB1Q9Y5F3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHB1Q9Y5F3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHB1Q9Y5F3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms