Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 AC079089.2-201ENST00000531211 1277 ntBASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 AF213884.3-201ENST00000563833 479 ntBASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 AL031432.3-201ENST00000607698 485 ntBASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA9Q9UGM1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 MIR939-201ENST00000401314 82 ntBASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 AC091305.1-201ENST00000479476 895 ntBASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 OXCT2P1-201ENST00000447263 1535 ntBASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA9Q9UGM1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 RASA4CP-201ENST00000424092 1398 ntBASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA9Q9UGM1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA9Q9UGM1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA9Q9UGM1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CHRNA9Q9UGM1 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.62■□□□□ 0.73
CHRNA9Q9UGM1 IGHV3-19-201ENST00000521488 291 ntBASIC19.62■□□□□ 0.73
CHRNA9Q9UGM1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA9Q9UGM1 AL136967.2-201ENST00000623968 743 ntBASIC19.62■□□□□ 0.73
CHRNA9Q9UGM1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA9Q9UGM1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA9Q9UGM1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CHRNA9Q9UGM1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNA9Q9UGM1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA9Q9UGM1 SUDS3P1-201ENST00000505831 966 ntBASIC19.61■□□□□ 0.73
CHRNA9Q9UGM1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNA9Q9UGM1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA9Q9UGM1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA9Q9UGM1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 AC142381.2-201ENST00000566120 298 ntBASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA9Q9UGM1 OR7E47P-201ENST00000546390 1422 ntBASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 AC010542.4-201ENST00000563151 1910 ntBASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 MIR638-201ENST00000385237 100 ntBASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 AC005837.3-201ENST00000612163 286 ntBASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHRNA9Q9UGM1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms