Protein–RNA interactions for Protein: Q9H159

CDH19, Cadherin-19, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19Q9H159 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CDH19Q9H159 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH19Q9H159 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
CDH19Q9H159 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH19Q9H159 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH19Q9H159 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH19Q9H159 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH19Q9H159 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH19Q9H159 IRS3P-201ENST00000223076 1006 ntBASIC21.77■■□□□ 1.08
CDH19Q9H159 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH19Q9H159 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH19Q9H159 AC092666.2-201ENST00000613287 246 ntBASIC21.77■■□□□ 1.08
CDH19Q9H159 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH19Q9H159 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH19Q9H159 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH19Q9H159 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH19Q9H159 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
CDH19Q9H159 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.77■■□□□ 1.07
CDH19Q9H159 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.07
CDH19Q9H159 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH19Q9H159 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH19Q9H159 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH19Q9H159 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH19Q9H159 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH19Q9H159 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH19Q9H159 MIR5787-201ENST00000611784 55 ntBASIC21.76■■□□□ 1.07
CDH19Q9H159 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH19Q9H159 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CDH19Q9H159 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CDH19Q9H159 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH19Q9H159 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH19Q9H159 AC080038.3-201ENST00000623346 1952 ntBASIC21.76■■□□□ 1.07
CDH19Q9H159 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH19Q9H159 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH19Q9H159 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH19Q9H159 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH19Q9H159 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDH19Q9H159 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH19Q9H159 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH19Q9H159 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH19Q9H159 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH19Q9H159 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH19Q9H159 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH19Q9H159 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.75■■□□□ 1.07
CDH19Q9H159 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH19Q9H159 TSPY26P-201ENST00000476365 1326 ntBASIC21.75■■□□□ 1.07
CDH19Q9H159 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CDH19Q9H159 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH19Q9H159 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH19Q9H159 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CDH19Q9H159 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH19Q9H159 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH19Q9H159 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH19Q9H159 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH19Q9H159 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
CDH19Q9H159 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH19Q9H159 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH19Q9H159 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH19Q9H159 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH19Q9H159 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CDH19Q9H159 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH19Q9H159 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.73■■□□□ 1.07
CDH19Q9H159 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.73■■□□□ 1.07
CDH19Q9H159 OXCT2P1-201ENST00000447263 1535 ntBASIC21.73■■□□□ 1.07
CDH19Q9H159 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH19Q9H159 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH19Q9H159 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH19Q9H159 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH19Q9H159 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH19Q9H159 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH19Q9H159 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH19Q9H159 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.72■■□□□ 1.07
CDH19Q9H159 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH19Q9H159 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH19Q9H159 AL137060.1-201ENST00000618151 2648 ntBASIC21.72■■□□□ 1.07
CDH19Q9H159 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CDH19Q9H159 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH19Q9H159 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CDH19Q9H159 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDH19Q9H159 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH19Q9H159 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CDH19Q9H159 MIR572-201ENST00000384983 95 ntBASIC21.71■■□□□ 1.07
CDH19Q9H159 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH19Q9H159 AC104564.3-201ENST00000582367 638 ntBASIC21.71■■□□□ 1.07
CDH19Q9H159 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH19Q9H159 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH19Q9H159 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CDH19Q9H159 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.71■■□□□ 1.07
CDH19Q9H159 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDH19Q9H159 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDH19Q9H159 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH19Q9H159 AC087742.1-201ENST00000575880 1738 ntBASIC21.7■■□□□ 1.06
CDH19Q9H159 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.7■■□□□ 1.06
CDH19Q9H159 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.7■■□□□ 1.06
CDH19Q9H159 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH19Q9H159 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH19Q9H159 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH19Q9H159 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CDH19Q9H159 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDH19Q9H159 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms